3DPolyS-LE: an accessible simulation framework to model the interplay between chromatin and loop extrusion. - Todor Gitchev; Gabriel Zala; Peter Meister; Daniel Jost 002 (Bioinform., 2022)

Fragmentstein - facilitating data reuse for cell-free DNA fragment analysis. - Zsolt Balázs; Todor Gitchev; Ivna Ivankovic; Michael Krauthammer (Bioinform., 2024)