Pulmonary lobe segmentation from CT images using fissureness, airways, vessels and multilevel B-splines. - Tom Doel; Tahreema N. Matin; Fergus Gleeson; David Gavaghan; Vicente Grau (ISBI, 2012)

Review of automatic pulmonary lobe segmentation methods from CT. - Tom Doel; David J. Gavaghan; Vicente Grau (Comput. Medical Imaging Graph., 2015)

Dynamically Balanced Online Random Forests for Interactive Scribble-Based Segmentation. - Guotai Wang; Maria A. Zuluaga; Rosalind Pratt; Michael Aertsen; Tom Doel; Maria Klusmann; Anna L. David; Jan Deprest; Tom Vercauteren; Sébastien Ourselin (MICCAI (2), 2016)

Slic-Seg: A minimally interactive segmentation of the placenta from sparse and motion-corrupted fetal MRI in multiple views. - Guotai Wang; Maria A. Zuluaga; Rosalind Pratt; Michael Aertsen; Tom Doel; Maria Klusmann; Anna L. David; Jan Deprest; Tom Vercauteren; Sébastien Ourselin (Medical Image Anal., 2016)

A combined image-modelling approach assessing the impact of hyperinflation due to emphysema on regional ventilation-perfusion matching. - Kelly S. Burrowes; Tom Doel; Minsuok Kim; Claudia Vargas; Josep Roca; Vicente Grau; D. Kay (Comput. methods Biomech. Biomed. Eng. Imaging Vis., 2017)

GIFT-Cloud: A data sharing and collaboration platform for medical imaging research. - Tom Doel; Dzhoshkun I. Shakir; Rosalind Pratt; Michael Aertsen; James Moggridge; Erwin Bellon; Anna L. David; Jan Deprest; Tom Vercauteren; Sébastien Ourselin (Comput. Methods Programs Biomed., 2017)

NiftyNet: a deep-learning platform for medical imaging. - Eli Gibson; Wenqi Li 001; Carole H. Sudre; Lucas Fidon; Dzhoshkun I. Shakir; Guotai Wang; Zach Eaton-Rosen; Robert J. Gray; Tom Doel; Yipeng Hu; Tom Whyntie; Parashkev Nachev; et al. (CoRR, 2017)

An Automated Localization, Segmentation and Reconstruction Framework for Fetal Brain MRI. - Michael Ebner; Guotai Wang; Wenqi Li 001; Michael Aertsen; Premal A. Patel; Rosalind Aughwane; Andrew Melbourne; Tom Doel; Anna L. David; Jan Deprest; Sébastien Ourselin; Tom Vercauteren (MICCAI (1), 2018)

NiftyNet: a deep-learning platform for medical imaging. - Eli Gibson; Wenqi Li 001; Carole H. Sudre; Lucas Fidon; Dzhoshkun I. Shakir; Guotai Wang; Zach Eaton-Rosen; Robert J. Gray; Tom Doel; Yipeng Hu; Tom Whyntie; Parashkev Nachev; et al. (Comput. Methods Programs Biomed., 2018)

Interactive Medical Image Segmentation Using Deep Learning With Image-Specific Fine Tuning. - Guotai Wang; Wenqi Li 001; Maria A. Zuluaga; Rosalind Pratt; Premal A. Patel; Michael Aertsen; Tom Doel; Anna L. David; Jan Deprest; Sébastien Ourselin; Tom Vercauteren (IEEE Trans. Medical Imaging, 2018)

Design choices for productive, secure, data-intensive research at scale in the cloud. - Diego Arenas; Jon Atkins; Clare Austin; David Beavan; Alvaro Cabrejas Egea; Stephen Carlysle-Davies; Ian Carter; Rob Clarke; James Cunningham; Tom Doel; Oliver Forrest; Evelina Gabasova; et al. (CoRR, 2019)

DeepIGeoS: A Deep Interactive Geodesic Framework for Medical Image Segmentation. - Guotai Wang; Maria A. Zuluaga; Wenqi Li 001; Rosalind Pratt; Premal A. Patel; Michael Aertsen; Tom Doel; Anna L. David; Jan Deprest; Sébastien Ourselin; Tom Vercauteren (IEEE Trans. Pattern Anal. Mach. Intell., 2019)

An automated framework for localization, segmentation and super-resolution reconstruction of fetal brain MRI. - Michael Ebner; Guotai Wang; Wenqi Li 001; Michael Aertsen; Premal A. Patel; Rosalind Aughwane; Andrew Melbourne; Tom Doel; Steven Dymarkowski; Paolo De Coppi; Anna L. David; Jan Deprest; et al. (NeuroImage, 2020)

Evaluation of automated airway morphological quantification for assessing fibrosing lung disease. - Ashkan Pakzad; Wing Keung Cheung; Kin Quan; Nesrin Mogulkoc; Coline H. M. Van Moorsel; Brian J. Bartholmai; Hendrik W. Van Es; Alper Ezircan; Frouke Van Beek; Marcel Veltkamp; Ronald A. Karwoski; Tobias Peikert; et al. (CoRR, 2021)

Evaluation of automated airway morphological quantification for assessing fibrosing lung disease. - Ashkan Pakzad; Wing Keung Cheung; Coline H. M. Van Moorsel; Kin Quan; Nesrin Mogulkoc; Brian J. Bartholmai; H. W. Van Es; Alper Ezircan; Frouke Van Beek; Marcel Veltkamp; Ronald A. Karwoski; T. Peikert; et al. (Comput. methods Biomech. Biomed. Eng. Imaging Vis., 2024)