Multi-Niche Crowding in Genetic Algorithms and its Application to the Assembly of DNA Restriction-Fragments. - Walter Cedeño; V. Rao Vemuri; Tom Slezak (Evol. Comput., 1994)

A database system for constructing, integrating, and displaying physical maps of chromosome 19. - Tom Slezak; Mark Wagner; Mimi Yeh; Linda Ashworth; David Nelson; David Ow; Elbert Branscomb; Anthony Carrano (HICSS (5), 1995)

DataFoundry: information management for scientific data. - Terence Critchlow; Krzysztof Fidelis; Madhavan Ganesh; Ron Musick; Tom Slezak (IEEE Trans. Inf. Technol. Biomed., 2000)

Experiences applying meta-data to bioinformatics. - Terence Critchlow; Ron Musick; Tom Slezak (Inf. Sci., 2001)

Rapid development of nucleic acid diagnostics. - J. Patrick Fitch; Shea N. Gardner; Thomas A. Kuczmarski; Stefan Kurtz; Rich Myers; Linda L. Ott; Thomas R. Slezak; Elizabeth A. Vitalis; Adam T. Zemla; Paula M. McCready (Proc. IEEE, 2002)

An Applications-focused Review of Comparative Genomics Tools: Capabilities, Limitations and Future Challenges. - Patrick S. G. Chain; Stefan Kurtz; Enno Ohlebusch; Tom Slezak (Briefings Bioinform., 2003)

Comparative Genomics Tools Applied to Bioterrorism Defence. - Tom Slezak; Tom Kuczmarski; Linda L. Ott; Clinton Torres; Dan Medeiros; Jason Smith 002; Brian Truitt; Nisha Mulakken; Marisa Lam; Elizabeth A. Vitalis; Adam T. Zemla; Carol L. Ecale Zhou; et al. (Briefings Bioinform., 2003)

Invited Talk: A large-scale application of comparative genomics for biodefense. - Tom Slezak (German Conference on Bioinformatics, 2005)

AS2TS system for protein structure modeling and analysis. - Adam T. Zemla; Carol L. Ecale Zhou; Tom Slezak; Tom Kuczmarski; D. Rama; Clinton Torres; D. Sawicka; Daniel Barsky (Nucleic Acids Res., 2005)

MannDB - A microbial database of automated protein sequence analyses and evidence integration for protein characterization. - Carol L. Ecale Zhou; Marisa Lam; Jason Smith 002; Adam T. Zemla; Matthew D. Dyer; Thomas A. Kuczmarski; Elizabeth A. Vitalis; Thomas R. Slezak (BMC Bioinform., 2006)

Effect of the mutation rate and background size on the quality of pathogen identification. - Chris Reed 003; Viacheslav Fofanov; Catherine Putonti; Sergei Chumakov; Tom Slezak; Yuriy Fofanov (Bioinform., 2007)

MvirDB - a microbial database of protein toxins, virulence factors and antibiotic resistance genes for bio-defence applications. - Carol L. Ecale Zhou; Jason Smith 002; Marisa Lam; Adam T. Zemla; Matthew D. Dyer; Tom Slezak (Nucleic Acids Res., 2007)

Simulate_PCR for amplicon prediction and annotation from multiplex, degenerate primers and probes. - Shea N. Gardner; Tom Slezak (BMC Bioinform., 2014)

kSNP3.0: SNP detection and phylogenetic analysis of genomes without genome alignment or reference genome. - Shea N. Gardner; Tom Slezak; Barry G. Hall (Bioinform., 2015)