Visualization of Biomedical Processes: Local Quantitative Physiological Functions in Living Human Body. - David Dagan Feng; Weidong Cai 001 (Computer Graphics International, 2000)

A 3D Image Smoothing Method for Dynamic Functional Imaging. - Tom Weidong Cai; David Dagan Feng; Roger R. Fulton (VIP, 2000)

A Web Based Medical Image Data Processing and Management System. - Jinman Kim; David Dagan Feng; Tom Weidong Cai (VIP, 2000)

A Web-based Collaborative System for Medical Image Analysis and Diagnosis. - Yu S. Lim; David Dagan Feng; Tom Weidong Cai (VIP, 2000)

Content-based retrieval of dynamic PET functional images. - Weidong Cai 001; David Dagan Feng; Roger R. Fulton (IEEE Trans. Inf. Technol. Biomed., 2000)

Integrated Multimedia Medical Data Agent in E-Health. - Jinman Kim; David Dagan Feng; Tom Weidong Cai; Stefan Eberl (VIP, 2001)

A Solution to the Distribution and Standarization of Multimedia Medical Data in E-Health. - Jinman Kim; David Dagan Feng; Tom Weidong Cai; Stefan Eberl (VIP, 2001)

Web-Based Digital Medical Images. - Weidong Cai 001; David Dagan Feng; Roger R. Fulton (IEEE Computer Graphics and Applications, 2001)

Content access and distribution of multimedia medical data in E-health. - Jinman Kim; David Dagan Feng; Tom Weidong Cai; Stefan Eberl (ICME (2), 2002)

Automatic Detection of PET Lesions. - Zhe Chen 013; David Dagan Feng; Weidong Cai 001 (VIP, 2002)

Generalized linear least squares algorithms for modeling glucose metabolism in the human brain with corrections for vascular effects. - Weidong Cai 001; David Dagan Feng; Roger R. Fulton; Wan-Chi Siu (Comput. Methods Programs Biomed., 2002)

Dynamic image data compression in the spatial and temporal domains: clinical issues and assessment. - David Dagan Feng; Weidong Cai 001; Roger R. Fulton (IEEE Trans. Inf. Technol. Biomed., 2002)

Pathological lesion detection in 3D dynamic PET images using asymmetry. - Zhe Chen 013; David Dagan Feng; Weidong Cai 001 (ICIAP, 2003)

Temporal and Spatial Compression of Dynamic Positron Emission Tomography in Sinogram Domain. - Zhe Chen 013; David Dagan Feng; Weidong Cai 001 (Int. J. Image Graph., 2005)

Performance evaluation of functional medical imaging compression via optimal sampling schedule designs and cluster analysis. - Zhe Chen 013; David Dagan Feng; Weidong Cai 001; Roger R. Fulton (IEEE Trans. Biomed. Eng., 2005)

Interactive dual-volume rendering visualization with real-time fusion and transfer function enhancement. - Hugh Macready; Jinman Kim; David Feng 003; Weidong Cai 001 (Image-Guided Procedures, 2006)

Segmentation of VOI From Multidimensional Dynamic PET Images by Integrating Spatial and Temporal Features. - Jinman Kim; Weidong Cai 001; David Dagan Feng; Stefan Eberl (IEEE Trans. Inf. Technol. Biomed., 2006)

A New Way for Multidimensional Medical Data Management: Volume of Interest (VOI)-Based Retrieval of Medical Images With Visual and Functional Features. - Jinman Kim; Weidong Cai 001; David Dagan Feng; Hao Wu (IEEE Trans. Inf. Technol. Biomed., 2006)

Real-Time Volume Rendering Visualization of Dual-Modality PET/CT Images With Interactive Fuzzy Thresholding Segmentation. - Jinman Kim; Weidong Cai 001; Stefan Eberl; David Dagan Feng (IEEE Trans. Inf. Technol. Biomed., 2007)

Fast and Reliable Estimation of Multiple Parametric Images Using an Integrated Method for Dynamic SPECT. - Lingfeng Wen; Stefan Eberl; David Dagan Feng; Tom Weidong Cai; Jing Bai (IEEE Trans. Medical Imaging, 2007)

New Block-Based Motion Estimation for Sequences with Brightness Variation and Its Application to Static Sprite Generation for Video Compression. - Hoi-Kok Cheung; Wan-Chi Siu; David Dagan Feng; Tom Weidong Cai (IEEE Trans. Circuits Syst. Video Technol., 2008)

Bridging the Feature Gaps for Retrieval of Multi-Dimensional Images. - Jinman Kim; Weidong Cai 001; David Dagan Feng (Int. J. Heal. Inf. Syst. Informatics, 2009)

Localized multiscale texture based retrieval of neurological image. - Sidong Liu; Lei Jing; Weidong Cai 001; Lingfeng Wen; Stefan Eberl; Michael J. Fulham; David Dagan Feng (CBMS, 2010)

A content-based image retrieval framework for multi-modality lung images. - Yang Song 001; Weidong Cai 001; Stefan Eberl; Michael J. Fulham; David Dagan Feng (CBMS, 2010)

Structure-Adaptive Feature Extraction and Representation for Multi-modality Lung Images Retrieval. - Yang Song 001; Weidong Cai 001; Stefan Eberl; Michael J. Fulham; David Dagan Feng (DICTA, 2010)

3D neurological image retrieval with localized pathology-centric CMRGlc patterns. - Weidong Cai 001; Sidong Liu; Lingfeng Wen; Stefan Eberl; Michael J. Fulham; David Dagan Feng (ICIP, 2010)

Robust, accurate and efficient face recognition from a single training image: A uniform pursuit approach. - Weihong Deng; Jiani Hu; Jun Guo 002; Weidong Cai 001; David Dagan Feng (Pattern Recognit., 2010)

Emulating biological strategies for uncontrolled face recognition. - Weihong Deng; Jiani Hu; Jun Guo 002; Weidong Cai 001; David Dagan Feng (Pattern Recognit., 2010)

A Study on Static Image Derived Input Function for Non-invasively Constructing Parametric Image in Functional Imaging. - Xian Shi; Lingfeng Wen; Weidong Cai 001; David Dagan Feng (DICTA, 2011)

Generalized regional disorder-sensitive-weighting scheme for 3D neuroimaging retrieval. - Sidong Liu; Weidong Cai 001; Lingfeng Wen; Stefan Eberl; Michael J. Fulham; David Dagan Feng (EMBC, 2011)

Thoracic image matching with appearance and spatial distribution. - Yang Song 001; Weidong Cai 001; Stefan Eberl; Michael J. Fulham; David Dagan Feng (EMBC, 2011)

Localized functional neuroimaging retrieval using 3D discrete curvelet transform. - Sidong Liu; Weidong Cai 001; Lingfeng Wen; Stefan Eberl; Michael J. Fulham; David Dagan Feng (ISBI, 2011)

Thoracic image case retrieval with spatial and contextual information. - Yang Song 001; Weidong Cai 001; Stefan Eberl; Michael J. Fulham; David Dagan Feng (ISBI, 2011)

Discriminative Pathological Context Detection in Thoracic Images Based on Multi-level Inference. - Yang Song 001; Weidong Cai 001; Stefan Eberl; Michael J. Fulham; David Dagan Feng (MICCAI (3), 2011)

Object localization in medical images based on graphical model with contrast and interest-region terms. - Yang Song 001; Weidong Cai 001; Heng Huang; Yue Wang 021; David Dagan Feng (CVPR Workshops, 2012)

Microscopic Image Segmentation with Two-Level Enhancement of Feature Discriminability. - Yang Song 001; Weidong Cai 001; David Dagan Feng (DICTA, 2012)

Multiscale and multiorientation feature extraction with degenerative patterns for 3D neuroimaging retrieval. - Sidong Liu; Weidong Cai 001; Lingfeng Wen; David Dagan Feng (ICIP, 2012)

Regression and classification based distance metric learning for medical image retrieval. - Weidong Cai 001; Yang Song 001; David Dagan Feng (ISBI, 2012)

Global context inference for adaptive abnormality detection in PET-CT images. - Yang Song 001; Weidong Cai 001; David Dagan Feng (ISBI, 2012)

Location classification of lung nodules with optimized graph construction. - Yang Song 001; Weidong Cai 001; Yue Wang 021; David Dagan Feng (ISBI, 2012)

Context Enhanced Graphical Model for Object Localization in Medical Images. - Yang Song 001; Weidong Cai 001; Heng Huang; Yue Wang 021; David Dagan Feng (MCV, 2012)

Thoracic Abnormality Detection with Data Adaptive Structure Estimation. - Yang Song 001; Weidong Cai 001; Yun Zhou 006; Dagan Feng 001 (MICCAI (1), 2012)

A Multistage Discriminative Model for Tumor and Lymph Node Detection in Thoracic Images. - Yang Song 001; Weidong Cai 001; Jinman Kim; David Dagan Feng (IEEE Trans. Medical Imaging, 2012)

Context Curves for Classification of Lung Nodule Images. - Fan Zhang 013; Yang Song 001; Weidong Cai 001; Yun Zhou 006; Shimin Shan; Dagan Feng 001 (DICTA, 2013)

Fully automated scoring of chest radiographs in cystic fibrosis. - Min-Zhao Lee; Weidong Cai 001; Yang Song 001; Hiran Selvadurai; David Dagan Feng (EMBC, 2013)

Lung image patch classification with automatic feature learning. - Qing Li 012; Weidong Cai 001; David Dagan Feng (EMBC, 2013)

Localized Sparse Code Gradient in Alzheimer's disease staging. - Sidong Liu; Weidong Cai 001; Yang Song 001; Sonia Pujol; Ron Kikinis; Lingfeng Wen; David Dagan Feng (EMBC, 2013)

Cell nuclei segmentation in fluorescence microscopy images using inter- and intra-region discriminative information. - Yang Song 001; Weidong Cai 001; David Dagan Feng; Mei Chen (EMBC, 2013)

Overlapping node discovery for improving classification of lung nodules. - Fan Zhang 013; Weidong Cai 001; Yang Song 001; Min-Zhao Lee; Shimin Shan; David Dagan Feng (EMBC, 2013)

New Graph Structured Sparsity Model for Multi-label Image Annotations. - Xiao Cai; Feiping Nie 001; Weidong Cai 001; Heng Huang (ICCV, 2013)

Heterogeneous Image Features Integration via Multi-modal Semi-supervised Learning Model. - Xiao Cai; Feiping Nie 001; Weidong Cai 001; Heng Huang (ICCV, 2013)

Semi-supervised Robust Dictionary Learning via Efficient l-Norms Minimization. - Hua Wang 007; Feiping Nie 001; Weidong Cai 001; Heng Huang (ICCV, 2013)

A supervised multiview spectral embedding method for neuroimaging classification. - Sidong Liu; Lelin Zhang; Weidong Cai 001; Yang Song 001; Zhiyong Wang 001; Lingfeng Wen; David Dagan Feng (ICIP, 2013)

Graph cuts based relevance feedback in image retrieval. - Lelin Zhang; Sidong Liu; Zhiyong Wang 001; Weidong Cai 001; Yang Song 001; David Dagan Feng (ICIP, 2013)

Multi-Channel brain atrophy pattern analysis in neuroimaging retrieval. - Sidong Liu; Weidong Cai 001; Lingfeng Wen; Dagan Feng 001 (ISBI, 2013)

Neuroimaging biomarker based prediction of Alzheimer'S disease severity with optimized graph construction. - Sidong Liu; Weidong Cai 001; Lingfeng Wen; Dagan Feng 001 (ISBI, 2013)

Pathology-centric medical image retrieval with hierarchical contextual spatial descriptor. - Yang Song 001; Weidong Cai 001; Yun Zhou 006; Lingfeng Wen; David Dagan Feng (ISBI, 2013)

A New Sparse Simplex Model for Brain Anatomical and Genetic Network Analysis. - Heng Huang; Jingwen Yan; Feiping Nie 001; Jin Huang; Weidong Cai 001; Andrew J. Saykin; Li Shen 001 (MICCAI (2), 2013)

Multifold Bayesian Kernelization in Alzheimer's Diagnosis. - Sidong Liu; Yang Song 001; Weidong Cai 001; Sonia Pujol; Ron Kikinis; Xiaogang Wang 001; Dagan Feng 001 (MICCAI (2), 2013)

Discriminative Data Transform for Image Feature Extraction and Classification. - Yang Song 001; Weidong Cai 001; Seungil Huh; Mei Chen; Takeo Kanade; Yun Zhou 006; Dagan Feng 001 (MICCAI (2), 2013)

Similarity Guided Feature Labeling for Lesion Detection. - Yang Song 001; Weidong Cai 001; Heng Huang; Xiaogang Wang 001; Stefan Eberl; Michael J. Fulham; Dagan Feng 001 (MICCAI (1), 2013)

Region-based progressive localization of cell nuclei in microscopic images with data adaptive modeling. - Yang Song 001; Weidong Cai 001; Heng Huang; Yue Wang 021; David Dagan Feng; Mei Chen (BMC Bioinform., 2013)

Content-Based Medical Image Retrieval: A Survey of Applications to Multidimensional and Multimodality Data. - Ashnil Kumar; Jinman Kim; Weidong Cai 001; Michael J. Fulham; Dagan Feng 001 (J. Digit. Imaging, 2013)

Feature-Based Image Patch Approximation for Lung Tissue Classification. - Yang Song 001; Weidong Cai 001; Yun Zhou 006; David Dagan Feng (IEEE Trans. Medical Imaging, 2013)

Latent Semantic Association for Medical Image Retrieval. - Fan Zhang 013; Yang Song 001; Sidong Liu; Sonia Pujol; Ron Kikinis; David Dagan Feng; Tom Weidong Cai (DICTA, 2014)

Hierarchical and binary spatial descriptors for lung nodule image retrieval. - Gillian Ng; Yang Song 001; Weidong Cai 001; Yun Zhou 006; Sidong Liu; David Dagan Feng (EMBC, 2014)

Medical image classification with convolutional neural network. - Qing Li 012; Weidong Cai 001; Xiaogang Wang 001; Yun Zhou 006; David Dagan Feng; Mei Chen (ICARCV, 2014)

Propagation graph fusion for multi-modal medical content-based retrieval. - Sidong Liu; Siqi Liu 001; Sonia Pujol; Ron Kikinis; Dagan Feng 001; Weidong Cai 001 (ICARCV, 2014)

Automated three-stage nucleus and cytoplasm segmentation of overlapping cells. - Afaf Tareef; Yang Song 001; Weidong Cai 001; David Dagan Feng; Mei Chen (ICARCV, 2014)

Image noise level estimation based on a new adaptive superpixel classification. - Peng Fu 003; ChangYang Li; Quan-Sen Sun; Tom Weidong Cai; David Dagan Feng (ICIP, 2014)

Automated feedback extraction for medical imaging retrieval. - Weidong Cai 001; Fan Zhang 013; Yang Song 001; Sidong Liu; Lingfeng Wen; Stefan Eberl; Michael J. Fulham; Dagan Feng 001 (ISBI, 2014)

Co-neighbor multi-view spectral embedding for medical content-based retrieval. - Hangyu Che; Sidong Liu; Weidong Cai 001; Sonia Pujol; Ron Kikinis; Dagan Feng 001 (ISBI, 2014)

Early diagnosis of Alzheimer's disease with deep learning. - Siqi Liu 001; Sidong Liu; Weidong Cai 001; Sonia Pujol; Ron Kikinis; Dagan Feng 001 (ISBI, 2014)

Image-based ciliary beating frequency estimation for therapeutic assessment on defective mucociliary clearance diseases. - Fan Zhang 013; Weidong Cai 001; Yang Song 001; Paul M. Young; Daniela Traini; Lucy Morgan; Hui-Xin Ong; Lachlan Buddle; Dagan Feng 001 (ISBI, 2014)

A ranking-based lung nodule image classification method using unlabeled image knowledge. - Fan Zhang 013; Yang Song 001; Weidong Cai 001; Yun Zhou 006; Michael J. Fulham; Stefan Eberl; Shimin Shan; Dagan Feng 001 (ISBI, 2014)

Overview of the 2014 Workshop on Medical Computer Vision - Algorithms for Big Data (MCV 2014). - Henning Müller; Bjoern H. Menze; Georg Langs; Albert Montillo; B. Michael Kelm; Shaoting Zhang 001; Tom Weidong Cai; Dimitris N. Metaxas (MCV, 2014)

Large Margin Aggregation of Local Estimates for Medical Image Classification. - Yang Song 001; Tom Weidong Cai; Heng Huang; Yun Zhou 006; David Dagan Feng; Mei Chen (MICCAI (2), 2014)

Human Connectome Module Pattern Detection Using a New Multi-graph MinMax Cut Model. - De Wang; Yang Wang; Feiping Nie 001; Jingwen Yan; Tom Weidong Cai; Andrew J. Saykin; Li Shen 001; Heng Huang (MICCAI (3), 2014)

Multi-Channel neurodegenerative pattern analysis and its application in Alzheimer's disease characterization. - Sidong Liu; Weidong Cai 001; Lingfeng Wen; David Dagan Feng; Sonia Pujol; Ron Kikinis; Michael J. Fulham; Stefan Eberl (Comput. Medical Imaging Graph., 2014)

Lung Nodule Classification With Multilevel Patch-Based Context Analysis. - Fan Zhang 013; Yang Song 001; Weidong Cai 001; Min-Zhao Lee; Yun Zhou 006; Heng Huang; Shimin Shan; Michael J. Fulham; David Dagan Feng (IEEE Trans. Biomed. Eng., 2014)

Lesion Detection and Characterization With Context Driven Approximation in Thoracic FDG PET-CT Images of NSCLC Studies. - Yang Song 001; Weidong Cai 001; Heng Huang; Xiaogang Wang 001; Yun Zhou 006; Michael J. Fulham; David Dagan Feng (IEEE Trans. Medical Imaging, 2014)

Multi-Phase Feature Representation Learning for Neurodegenerative Disease Diagnosis. - Siqi Liu 001; Sidong Liu; Tom Weidong Cai; Sonia Pujol; Ron Kikinis; David Dagan Feng (ACALCI, 2015)

Ranking-Based Vocabulary Pruning in Bag-of-Features for Image Retrieval. - Fan Zhang 013; Yang Song 001; Tom Weidong Cai; Alexander G. Hauptmann; Sidong Liu; Siqi Liu 001; David Dagan Feng; Mei Chen (ACALCI, 2015)

Robust Capped Norm Nonnegative Matrix Factorization: Capped Norm NMF. - Hongchang Gao; Feiping Nie 001; Tom Weidong Cai; Heng Huang (CIKM, 2015)

Weakly Supervised Natural Language Processing Framework for Abstractive Multi-Document Summarization: Weakly Supervised Abstractive Multi-Document Summarization. - Peng Li 056; Tom Weidong Cai; Heng Huang (CIKM, 2015)

Robust saliency detection via regularized random walks ranking. - ChangYang Li; Yuchen Yuan; Weidong Cai 001; Yong Xia 001; David Dagan Feng (CVPR, 2015)

Fusing subcategory probabilities for texture classification. - Yang Song 001; Weidong Cai 001; Qing Li 012; Fan Zhang 013; David Dagan Feng; Heng Huang (CVPR, 2015)

Morphological Filtering and Hierarchical Deformation for Partially Overlapping Cell Segmentation. - Afaf Tareef; Yang Song 001; Min-Zhao Lee; David Dagan Feng; Mei Chen; Tom Weidong Cai (DICTA, 2015)

Content-Based Retrieval of Brain Diffusion Magnetic Resonance Image. - Siqi Liu 001; Nur Hadi; Sidong Liu; Sonia Pujol; Ron Kikinis; Fan Zhang 013; Dagan Feng 001; Weidong Cai 001 (MRDM@ECIR, 2015)

USYD/HES-SO in the VISCERAL Retrieval Benchmark. - Fan Zhang 013; Yang Song 001; Weidong Cai 001; Adrien Depeursinge; Henning Müller (MRDM@ECIR, 2015)

Semi-supervised manifold learning with affinity regularization for Alzheimer's disease identification using positron emission tomography imaging. - Shen Lu; Yong Xia 001; Tom Weidong Cai; David Dagan Feng (EMBC, 2015)

Subject-centered multi-view feature fusion for neuroimaging retrieval and classification. - Sidong Liu; Tom Weidong Cai; Siqi Liu 001; Sonia Pujol; Ron Kikinis; David Dagan Feng (ICIP, 2015)

Beating cilia identification in fluorescence microscope images for accurate CBF measurement. - Fan Zhang 013; Weidong Cai 001; Yang Song 001; Paul M. Young; Daniela Traini; Lucy Morgan; Hui-Xin Ong; Lachlan Buddle; Dagan Feng 001 (ICIP, 2015)

Learning Shape-Driven Segmentation Based on Neural Network and Sparse Reconstruction Toward Automated Cell Analysis of Cervical Smears. - Afaf Tareef; Yang Song 001; Weidong Cai 001; Heng Huang; Yue Wang 021; Dagan Feng 001; Mei Chen (ICONIP (1), 2015)

Longitudinal brain MR retrieval with diffeomorphic demons registration: What happened to those patients with similar changes? - Siqi Liu 001; Sidong Liu; Fan Zhang 013; Tom Weidong Cai; Sonia Pujol; Ron Kikinis; David Dagan Feng (ISBI, 2015)

Bone texture characterization with fisher encoding of local descriptors. - Yang Song 001; Weidong Cai 001; Fan Zhang 013; Heng Huang; Yun Zhou 006; David Dagan Feng (ISBI, 2015)

Anatomical Annotations for Drosophila Gene Expression Patterns via Multi-Dimensional Visual Descriptors Integration: Multi-Dimensional Feature Learning. - Hongchang Gao; Lin Yan 003; Weidong Cai 001; Heng Huang (KDD, 2015)

Overview of the 2015 Workshop on Medical Computer Vision - Algorithms for Big Data (MCV 2015). - Henning Müller; Bjoern H. Menze; Georg Langs; Albert Montillo; B. Michael Kelm; Shaoting Zhang 001; Weidong Cai 001; Dimitris N. Metaxas (MCV@MICCAI, 2015)

Motion Representation of Ciliated Cell Images with Contour-Alignment for Automated CBF Estimation. - Fan Zhang 013; Yang Song 001; Siqi Liu 001; Paul M. Young; Daniela Traini; Lucy Morgan; Hui-Xin Ong; Lachlan Buddle; Sidong Liu; David Dagan Feng; Tom Weidong Cai (MICCAI (3), 2015)

Multimodal neuroimaging computing: a review of the applications in neuropsychiatric disorders. - Sidong Liu; Weidong Cai 001; Siqi Liu 001; Fan Zhang 013; Michael J. Fulham; Dagan Feng 001; Sonia Pujol; Ron Kikinis (Brain Informatics, 2015)

Multimodal neuroimaging computing: the workflows, methods, and platforms. - Sidong Liu; Weidong Cai 001; Siqi Liu 001; Fan Zhang 013; Michael J. Fulham; Dagan Feng 001; Sonia Pujol; Ron Kikinis (Brain Informatics, 2015)

Morphometry-Based Longitudinal Neurodegeneration Simulation with MR Imaging. - Siqi Liu 001; Sidong Liu; Sonia Pujol; Ron Kikinis; Dagan Feng 001; Michael J. Fulham; Weidong Cai 001 (CoRR, 2015)

Locality-constrained Subcluster Representation Ensemble for lung image classification. - Yang Song 001; Tom Weidong Cai; Heng Huang; Yun Zhou 006; Yue Wang 021; David Dagan Feng (Medical Image Anal., 2015)

Multimodal Neuroimaging Feature Learning for Multiclass Diagnosis of Alzheimer's Disease. - Siqi Liu 001; Sidong Liu; Weidong Cai 001; Hangyu Che; Sonia Pujol; Ron Kikinis; Dagan Feng 001; Michael J. Fulham (IEEE Trans. Biomed. Eng., 2015)

Large Margin Local Estimate With Applications to Medical Image Classification. - Yang Song 001; Tom Weidong Cai; Heng Huang; Yun Zhou 006; David Dagan Feng; Yue Wang 021; Michael J. Fulham; Mei Chen (IEEE Trans. Medical Imaging, 2015)

Clique Identification and Propagation for Multimodal Brain Tumor Image Segmentation. - Sidong Liu; Yang Song 001; Fan Zhang 013; Dagan Feng 001; Michael J. Fulham; Tom Weidong Cai (BIH, 2016)

Histopathology Image Categorization with Discriminative Dimension Reduction of Fisher Vectors. - Yang Song 001; Qing Li 012; Heng Huang; Dagan Feng 001; Mei Chen; Tom Weidong Cai (ECCV Workshops (1), 2016)

Texture analysis of tissue aging using global and cluster constrained local coding. - Yang Song 001; Weidong Cai 001; Fan Zhang 013; Heng Huang; David Dagan Feng; Yue Wang 021; Mei Chen (ISBI, 2016)

Automatic nuclei and cytoplasm segmentation of leukocytes with color and texture-based image enhancement. - Afaf Tareef; Yang Song 001; Tom Weidong Cai; Yue Wang 021; David Dagan Feng; Mei Chen (ISBI, 2016)

Reconstruction of 3D neuron morphology using Rivulet back-tracking. - Donghao Zhang; Siqi Liu 001; Sidong Liu; Dagan Feng 001; Hanchuan Peng; Weidong Cai 001 (ISBI, 2016)

Fiber clustering based white matter connectivity analysis for prediction of Autism Spectrum Disorder using diffusion tensor imaging. - Fan Zhang 013; Peter Savadjiev; Tom Weidong Cai; Yang Song 001; Ragini Verma; Carl-Fredrik Westin; Lauren J. O'Donnell (ISBI, 2016)

Integrative Analysis of Cellular Morphometric Context Reveals Clinically Relevant Signatures in Lower Grade Glioma. - Ju Han; Yunfu Wang; Weidong Cai 001; Alexander Borowsky; Bahram Parvin; Hang Chang (MICCAI (1), 2016)

Lung Nodule Classification by Jointly Using Visual Descriptors and Deep Features. - Yutong Xie 001; Jianpeng Zhang; Sidong Liu; Weidong Cai 001; Yong Xia 001 (MCV/BAMBI@MICCAI, 2016)

Error Analysis of Generalized Nyström Kernel Regression. - Hong Chen 004; Haifeng Xia; Heng Huang; Weidong Cai 001 (NIPS, 2016)

Bioimage classification with subcategory discriminant transform of high dimensional visual descriptors. - Yang Song 001; Weidong Cai 001; Heng Huang; Dagan Feng 001; Yue Wang 021; Mei Chen (BMC Bioinform., 2016)

DeepGene: an advanced cancer type classifier based on deep learning and somatic point mutations. - Yuchen Yuan; Yi Shi; Changyang Li; Jinman Kim; Weidong Cai 001; Zeguang Han; David Dagan Feng (BMC Bioinform., 2016)

Texture image classification with discriminative neural networks. - Yang Song 001; Qing Li 012; Dagan Feng 001; Ju Jia Zou; Weidong Cai 001 (Comput. Vis. Media, 2016)

Dictionary pruning with visual word significance for medical image retrieval. - Fan Zhang 013; Yang Song 001; Weidong Cai 001; Alexander G. Hauptmann; Sidong Liu; Sonia Pujol; Ron Kikinis; Michael J. Fulham; David Dagan Feng; Mei Chen (Neurocomputing, 2016)

Rivulet: 3D Neuron Morphology Tracing with Iterative Back-Tracking. - Siqi Liu 001; Donghao Zhang; Sidong Liu; Dagan Feng 001; Hanchuan Peng; Weidong Cai 001 (Neuroinformatics, 2016)

Pairwise Latent Semantic Association for Similarity Computation in Medical Imaging. - Fan Zhang 013; Yang Song 001; Weidong Cai 001; Sidong Liu; Siqi Liu 001; Sonia Pujol; Ron Kikinis; Yong Xia 001; Michael J. Fulham; David Dagan Feng (IEEE Trans. Biomed. Eng., 2016)

Text- and Content-Based Medical Image Retrieval in the VISCERAL Retrieval Benchmark. - Fan Zhang 013; Yang Song 001; Weidong Cai 001; Adrien Depeursinge; Henning Müller (Cloud-Based Benchmarking of Medical Image Analysis, 2017)

Video Recovery via Learning Variation and Consistency of Images. - Zhouyuan Huo; Shangqian Gao; Weidong Cai 001; Heng Huang (AAAI, 2017)

Deep Clustering via Joint Convolutional Autoencoder Embedding and Relative Entropy Minimization. - Kamran Ghasedi Dizaji; Amirhossein Herandi; Cheng Deng; Weidong Cai 001; Heng Huang (ICCV, 2017)

Locally-Transferred Fisher Vectors for Texture Classification. - Yang Song 001; Fan Zhang 013; Qing Li 012; Heng Huang; Lauren J. O'Donnell; Weidong Cai 001 (ICCV, 2017)

Automatic 3D Single Neuron Reconstruction with Exhaustive Tracing. - Zihao Tang; Donghao Zhang; Siqi Liu 001; Yang Song 001; Hanchuan Peng; Weidong Cai 001 (ICCV Workshops, 2017)

Prostate segmentation in MR images using ensemble deep convolutional neural networks. - Haozhe Jia; Yong Xia 001; Tom Weidong Cai; Michael J. Fulham; David Dagan Feng (ISBI, 2017)

Adapting fisher vectors for histopathology image classification. - Yang Song 001; Ju Jia Zou; Hang Chang; Weidong Cai 001 (ISBI, 2017)

Automated multi-stage segmentation of white blood cells via optimizing color processing. - Afaf Tareef; Yang Song 001; Dagan Feng 001; Mei Chen; Weidong Cai 001 (ISBI, 2017)

Automated connectivity-based groupwise cortical atlas generation: Application to data of neurosurgical patients with brain tumors for cortical parcellation prediction. - Fan Zhang 013; Pegah Kahali; Yannick Suter; Isaiah Norton; Laura Rigolo; Peter Savadjiev; Yang Song 001; Yogesh Rathi; Tom Weidong Cai; William M. Wells III; Alexandra J. Golby; Lauren J. O'Donnell (ISBI, 2017)

Comparison between two white matter segmentation strategies: An investigation into white matter segmentation consistency. - Fan Zhang 013; Isaiah Norton; Weidong Cai 001; Yang Song 001; William M. Wells III; Lauren J. O'Donnell (ISBI, 2017)

Triple-Crossing 2.5D Convolutional Neural Network for Detecting Neuronal Arbours in 3D Microscopic Images. - Siqi Liu 001; Donghao Zhang; Yang Song 001; Hanchuan Peng; Weidong Cai 001 (MLMI@MICCAI, 2017)

Supervised Intra-embedding of Fisher Vectors for Histopathology Image Classification. - Yang Song 001; Hang Chang; Heng Huang; Weidong Cai 001 (MICCAI (3), 2017)

Transferable Multi-model Ensemble for Benign-Malignant Lung Nodule Classification on Chest CT. - Yutong Xie 001; Yong Xia 001; Jianpeng Zhang; David Dagan Feng; Michael J. Fulham; Weidong Cai 001 (MICCAI (3), 2017)

Supra-Threshold Fiber Cluster Statistics for Data-Driven Whole Brain Tractography Analysis. - Fan Zhang 013; Weining Wu; Lipeng Ning; Gloria McAnulty; Deborah P. Waber; Borjan A. Gagoski; Kiera Sarill; Hesham M. Hamoda; Yang Song 001; Weidong Cai 001; Yogesh Rathi; Lauren J. O'Donnell (MICCAI (1), 2017)

Regularized Modal Regression with Applications in Cognitive Impairment Prediction. - Xiaoqian Wang 001; Hong Chen 004; Weidong Cai 001; Dinggang Shen; Heng Huang (NIPS, 2017)

Early identification of mild cognitive impairment using incomplete random forest-robust support vector machine and FDG-PET imaging. - Shen Lu; Yong Xia 001; Weidong Cai 001; Michael J. Fulham; David Dagan Feng (Comput. Medical Imaging Graph., 2017)

Multi-sensor image fusion based on regional characteristics. - Fanjie Meng; Ruixia Shi; Dalong Shan; Yang Song 001; Wangpeng He; Weidong Cai 001 (Int. J. Distributed Sens. Networks, 2017)

A spatially cohesive superpixel model for image noise level estimation. - Peng Fu 003; Changyang Li; Weidong Cai 001; Quan-Sen Sun (Neurocomputing, 2017)

Automatic segmentation of overlapping cervical smear cells based on local distinctive features and guided shape deformation. - Afaf Tareef; Yang Song 001; Weidong Cai 001; Heng Huang; Hang Chang; Yue Wang 021; Michael J. Fulham; Dagan Feng 001; Mei Chen (Neurocomputing, 2017)

Optimizing the cervix cytological examination based on deep learning and dynamic shape modeling. - Afaf Tareef; Yang Song 001; Heng Huang; Yue Wang 021; Dagan Feng 001; Mei Chen; Weidong Cai 001 (Neurocomputing, 2017)

Guest Editorial: Special issue on advances in computing techniques for big medical image data. - Yuanjie Zheng; Shaoting Zhang 001; Junzhou Huang; Weidong Cai 001 (Neurocomputing, 2017)

Dual discriminative local coding for tissue aging analysis. - Yang Song 001; Qing Li 012; Fan Zhang 013; Heng Huang; Dagan Feng 001; Yue Wang 021; Mei Chen; Weidong Cai 001 (Medical Image Anal., 2017)

Low Dimensional Representation of Fisher Vectors for Microscopy Image Classification. - Yang Song 001; Qing Li 012; Heng Huang; Dagan Feng 001; Mei Chen; Weidong Cai 001 (IEEE Trans. Medical Imaging, 2017)

Automated Analysis of Chest Radiographs for Cystic Fibrosis Scoring. - Zhaowei Huang; Chen Ding 002; Lei Zhang 054; Min-Zhao Lee; Yang Song 001; Hiran Selvadurai; Dagan Feng 001; Yanning Zhang 001; Weidong Cai 001 (BICS, 2018)

Large Kernel Refine Fusion Net for Neuron Membrane Segmentation. - Dongnan Liu; Donghao Zhang; Yang Song 001; Chaoyi Zhang; Heng Huang; Mei Chen; Weidong Cai 001 (CVPR Workshops, 2018)

Memory and Time Efficient 3D Neuron Morphology Tracing in Large-Scale Images. - Heng Wang 007; Donghao Zhang; Yang Song 001; Siqi Liu 001; Rong Gao; Hanchuan Peng; Weidong Cai 001 (DICTA, 2018)

MS-GAN: GAN-Based Semantic Segmentation of Multiple Sclerosis Lesions in Brain Magnetic Resonance Imaging. - Chaoyi Zhang; Yang Song 001; Sidong Liu; Scott Lill; Chenyu Wang 001; Zihao Tang; Yuyi You; Yang Gao; Alexander Klistorner; Michael Barnett 006; Weidong Cai 001 (DICTA, 2018)

Densely Connected Large Kernel Convolutional Network for Semantic Membrane Segmentation in Microscopy Images. - Dongnan Liu; Donghao Zhang; Siqi Liu 001; Yang Song 001; Haozhe Jia; Dagan Feng 001; Yong Xia 001; Weidong Cai 001 (ICIP, 2018)

Whole Slide Image Classification via Iterative Patch Labelling. - Chaoyi Zhang; Yang Song 001; Donghao Zhang; Sidong Liu; Mei Chen; Weidong Cai 001 (ICIP, 2018)

3D Large Kernel Anisotropic Network for Brain Tumor Segmentation. - Dongnan Liu; Donghao Zhang; Yang Song 001; Fan Zhang 013; Lauren J. O'Donnell; Weidong Cai 001 (ICONIP (7), 2018)

Feature learning with component selective encoding for histopathology image classification. - Yang Song 001; Hang Chang; Yang Gao; Sidong Liu; Donghao Zhang; Junen Yao; Wojciech Chrzanowski; Weidong Cai 001 (ISBI, 2018)

Cross-cohort dementia identification using transfer learning with FDG-PET imaging. - Shen Lu; Yong Xia 001; Weidong Cai 001; David Dagan Feng; Michael J. Fulham (ISBI, 2018)

Nuclei instance segmentation with dual contour-enhanced adversarial network. - Donghao Zhang; Yang Song 001; Siqi Liu 001; Dagan Feng 001; Yue Wang 021; Weidong Cai 001 (ISBI, 2018)

3D Anisotropic Hybrid Network: Transferring Convolutional Features from 2D Images to 3D Anisotropic Volumes. - Siqi Liu 001; Daguang Xu; Shaohua Kevin Zhou; Olivier Pauly; Sasa Grbic; Thomas Mertelmeier; Julia Wicklein; Anna K. Jerebko; Weidong Cai 001; Dorin Comaniciu (MICCAI (2), 2018)

Automatic Segmentation of Thigh Muscle in Longitudinal 3D T1-Weighted Magnetic Resonance (MR) Images. - Zihao Tang; Chenyu Wang 001; Phu Hoang; Sidong Liu; Weidong Cai 001; Domenic Soligo; Ruth Oliver; Michael Barnett 006; Ché Fornusek (DATRA/PIPPI@MICCAI, 2018)

Temporal Correlation Structure Learning for MCI Conversion Prediction. - Xiaoqian Wang 001; Weidong Cai 001; Dinggang Shen; Heng Huang (MICCAI (3), 2018)

Multiscale Network Followed Network Model for Retinal Vessel Segmentation. - Yicheng Wu 001; Yong Xia 001; Yang Song 001; Yanning Zhang 001; Weidong Cai 001 (MICCAI (2), 2018)

Panoptic Segmentation with an End-to-End Cell R-CNN for Pathology Image Analysis. - Donghao Zhang; Yang Song 001; Dongnan Liu; Haozhe Jia; Siqi Liu 001; Yong Xia 001; Heng Huang; Weidong Cai 001 (MICCAI (2), 2018)

3D Global Convolutional Adversarial Network for Prostate MR Volume Segmentation. - Haozhe Jia; Yang Song 001; Donghao Zhang; Heng Huang; Dagan Feng 001; Michael J. Fulham; Yong Xia 001; Weidong Cai 001 (CoRR, 2018)

Atlas registration and ensemble deep convolutional neural network-based prostate segmentation using magnetic resonance imaging. - Haozhe Jia; Yong Xia 001; Yang Song 001; Weidong Cai 001; Michael J. Fulham; David Dagan Feng (Neurocomputing, 2018)

Merged region based image retrieval. - Fanjie Meng; Dalong Shan; Ruixia Shi; Yang Song 001; Baolong Guo 001; Weidong Cai 001 (J. Vis. Commun. Image Represent., 2018)

Locality constrained encoding of frequency and spatial information for image classification. - Yongsheng Pan; Yong Xia 001; Yang Song 001; Weidong Cai 001 (Multim. Tools Appl., 2018)

Whole brain white matter connectivity analysis using machine learning: An application to autism. - Fan Zhang 013; Peter Savadjiev; Weidong Cai 001; Yang Song 001; Yogesh Rathi; Birkan Tunç; Drew Parker; Tina Kapur; Robert T. Schultz; Nikos Makris; Ragini Verma; Lauren J. O'Donnell (NeuroImage, 2018)

Suprathreshold fiber cluster statistics: Leveraging white matter geometry to enhance tractography statistical analysis. - Fan Zhang 013; Weining Wu; Lipeng Ning; Gloria McAnulty; Deborah P. Waber; Borjan A. Gagoski; Kiera Sarill; Hesham M. Hamoda; Yang Song 001; Weidong Cai 001; Yogesh Rathi; Lauren J. O'Donnell (NeuroImage, 2018)

Automated 3D Soma Segmentation with Morphological Surface Evolution for Neuron Reconstruction. - Donghao Zhang; Siqi Liu 001; Yang Song 001; Dagan Feng 001; Hanchuan Peng; Weidong Cai 001 (Neuroinformatics, 2018)

Dense and Sparse Labeling With Multidimensional Features for Saliency Detection. - Yuchen Yuan; Changyang Li; Jinman Kim; Weidong Cai 001; David Dagan Feng (IEEE Trans. Circuits Syst. Video Technol., 2018)

Reversion Correction and Regularized Random Walk Ranking for Saliency Detection. - Yuchen Yuan; Changyang Li; Jinman Kim; Weidong Cai 001; David Dagan Feng (IEEE Trans. Image Process., 2018)

Automated 3-D Neuron Tracing With Precise Branch Erasing and Confidence Controlled Back Tracking. - Siqi Liu 001; Donghao Zhang; Yang Song 001; Hanchuan Peng; Weidong Cai 001 (IEEE Trans. Medical Imaging, 2018)

Multi-Pass Fast Watershed for Accurate Segmentation of Overlapping Cervical Cells. - Afaf Tareef; Yang Song 001; Heng Huang; Dagan Feng 001; Mei Chen; Yue Wang 021; Weidong Cai 001 (IEEE Trans. Medical Imaging, 2018)

Anisotropic Hybrid Network for Cross-Dimension Transferable Feature Learning in 3D Medical Images. - Siqi Liu 001; Daguang Xu; Shaohua Kevin Zhou; Sasa Grbic; Weidong Cai 001; Dorin Comaniciu (Deep Learning and Convolutional Neural Networks for Medical Imaging and Clinical Informatics, 2019)

Efficient 3D Depthwise and Separable Convolutions with Dilation for Brain Tumor Segmentation. - Donghao Zhang; Yang Song 001; Dongnan Liu; Chaoyi Zhang; Yicheng Wu 001; Heng Wang 007; Fan Zhang 013; Yong Xia 001; Lauren J. O'Donnell; Weidong Cai 001 (Australasian Conference on Artificial Intelligence, 2019)

Multiscale Kernels for Enhanced U-Shaped Network to Improve 3D Neuron Tracing. - Heng Wang 007; Donghao Zhang; Yang Song 001; Siqi Liu 001; Heng Huang; Mei Chen; Hanchuan Peng; Weidong Cai 001 (CVPR Workshops, 2019)

Human Pose Estimation Using Deep Convolutional Densenet Hourglass Network with Intermediate Points Voting. - Shek Wai Chu; Yang Song 001; Ju Jia Zou; Weidong Cai 001 (ICIP, 2019)

Nuclei Segmentation via a Deep Panoptic Model with Semantic Feature Fusion. - Dongnan Liu; Donghao Zhang; Yang Song 001; Chaoyi Zhang; Fan Zhang 013; Lauren O'Donnell; Weidong Cai 001 (IJCAI, 2019)

Mask-Driven Mitosis Detection In Histopathology Images. - Veena Dodballapur; Yang Song 001; Heng Huang; Mei Chen; Wojciech Chrzanowski; Weidong Cai 001 (ISBI, 2019)

Segmenting Neuronal Structure in 3D Optical Microscope Images via Knowledge Distillation with Teacher-Student Network. - Heng Wang 007; Donghao Zhang; Yang Song 001; Siqi Liu 001; Yue Wang 021; Dagan Feng 001; Hanchuan Peng; Weidong Cai 001 (ISBI, 2019)

HD-Net: Hybrid Discriminative Network for Prostate Segmentation in MR Images. - Haozhe Jia; Yang Song 001; Heng Huang; Weidong Cai 001; Yong Xia 001 (MICCAI (2), 2019)

Vessel-Net: Retinal Vessel Segmentation Under Multi-path Supervision. - Yicheng Wu 001; Yong Xia 001; Yang Song 001; Donghao Zhang; Dongnan Liu; Chaoyi Zhang; Weidong Cai 001 (MICCAI (1), 2019)

Integrating Heterogeneous Brain Networks for Predicting Brain Disease Conditions. - Yanfu Zhang; Liang Zhan; Weidong Cai 001; Paul Thompson 001; Heng Huang (MICCAI (4), 2019)

Feature-Based Patch Matching for Moving Object Detection. - Mosin Russell; Ju Jia Zou; Gu Fang; Weidong Cai 001 (VCIP, 2019)

Region and Object based Panoptic Image Synthesis through Conditional GANs. - Heng Wang 007; Donghao Zhang; Yang Song 001; Heng Huang; Mei Chen; Weidong Cai 001 (CoRR, 2019)

Feature-Based Image Patch Classification for Moving Shadow Detection. - Mosin Russell; Ju Jia Zou; Gu Fang; Weidong Cai 001 (IEEE Trans. Circuits Syst. Video Technol., 2019)

Knowledge-based Collaborative Deep Learning for Benign-Malignant Lung Nodule Classification on Chest CT. - Yutong Xie 001; Yong Xia 001; Jianpeng Zhang; Yang Song 001; Dagan Feng 001; Michael J. Fulham; Weidong Cai 001 (IEEE Trans. Medical Imaging, 2019)

Shape-Oriented Convolution Neural Network for Point Cloud Analysis. - Chaoyi Zhang; Yang Song 001; Lina Yao 001; Weidong Cai 001 (AAAI, 2020)

H2NF-Net for Brain Tumor Segmentation Using Multimodal MR Imaging: 2nd Place Solution to BraTS Challenge 2020 Segmentation Task. - Haozhe Jia; Weidong Cai 001; Heng Huang; Yong Xia 001 (BrainLes@MICCAI (2), 2020)

Unsupervised Instance Segmentation in Microscopy Images via Panoptic Domain Adaptation and Task Re-Weighting. - Dongnan Liu; Donghao Zhang; Yang Song 001; Fan Zhang 013; Lauren O'Donnell; Heng Huang; Mei Chen; Weidong Cai 001 (CVPR, 2020)

Dual-Stage Domain Adaptive Mitosis Detection for Histopathology Images. - Veena Dodballapur; Yang Song 001; Heng Huang; Mei Chen; Wojciech Chrzanowski; Tom Weidong Cai (DICTA, 2020)

Automatic Dropout for Deep Neural Networks. - Veena Dodballapur; Rajanish Calisa; Yang Song 001; Weidong Cai 001 (ICONIP (3), 2020)

3D Conditional Adversarial Learning for Synthesizing Microscopic Neuron Image Using Skeleton-to-Neuron Translation. - Zihao Tang; Donghao Zhang; Yang Song 001; Heng Wang 007; Dongnan Liu; Chaoyi Zhang; Siqi Liu 001; Hanchuan Peng; Weidong Cai 001 (ISBI, 2020)

Predicting Potential Propensity of Adolescents to Drugs via New Semi-supervised Deep Ordinal Regression Model. - Alireza Ganjdanesh; Kamran Ghasedi; Liang Zhan; Weidong Cai 001; Heng Huang (MICCAI (1), 2020)

Learning High-Resolution and Efficient Non-local Features for Brain Glioma Segmentation in MR Images. - Haozhe Jia; Yong Xia 001; Weidong Cai 001; Heng Huang (MICCAI (4), 2020)

BiO-Net: Learning Recurrent Bi-directional Connections for Encoder-Decoder Architecture. - Tiange Xiang; Chaoyi Zhang; Dongnan Liu; Yang Song 001; Heng Huang; Weidong Cai 001 (MICCAI (1), 2020)

DeepAntigen: a novel method for neoantigen prioritization via 3D genome and deep sparse learning. - Yi Shi; Zehua Guo 004; Xianbin Su; Luming Meng; Mingxuan Zhang; Jing Sun; Chao Wu; Minhua Zheng; Xueyin Shang; Xin Zou; Wangqiu Cheng; Yaoliang Yu; et al. (Bioinform., 2020)

Cell R-CNN V3: A Novel Panoptic Paradigm for Instance Segmentation in Biomedical Images. - Dongnan Liu; Donghao Zhang; Yang Song 001; Heng Huang; Weidong Cai 001 (CoRR, 2020)

Graph Attention Network based Pruning for Reconstructing 3D Liver Vessel Morphology from Contrasted CT Images. - Donghao Zhang; Siqi Liu 001; Shikha Chaganti; Eli Gibson; Zhoubing Xu; Sasa Grbic; Weidong Cai 001; Dorin Comaniciu (CoRR, 2020)

ICE-GAN: Identity-aware and Capsule-Enhanced GAN for Micro-Expression Recognition and Synthesis. - Jianhui Yu; Chaoyi Zhang; Yang Song 001; Weidong Cai 001 (CoRR, 2020)

H2NF-Net for Brain Tumor Segmentation using Multimodal MR Imaging: 2nd Place Solution to BraTS Challenge 2020 Segmentation Task. - Haozhe Jia; Weidong Cai 001; Heng Huang; Yong Xia 001 (CoRR, 2020)

NFN＋: A novel network followed network for retinal vessel segmentation. - Yicheng Wu 001; Yong Xia 001; Yang Song 001; Yanning Zhang 001; Weidong Cai 001 (Neural Networks, 2020)

3D APA-Net: 3D Adversarial Pyramid Anisotropic Convolutional Network for Prostate Segmentation in MR Images. - Haozhe Jia; Yong Xia 001; Yang Song 001; Donghao Zhang; Heng Huang; Yanning Zhang 001; Weidong Cai 001 (IEEE Trans. Medical Imaging, 2020)

HNF-Netv2 for Brain Tumor Segmentation Using Multi-modal MR Imaging. - Haozhe Jia; Chao Bai; Weidong Cai 001; Heng Huang; Yong Xia 001 (BrainLes@MICCAI (2), 2021)

Network Pruning via Performance Maximization. - Shangqian Gao; Feihu Huang 001; Weidong Cai 001; Heng Huang (CVPR, 2021)

Exploiting Edge-Oriented Reasoning for 3D Point-Based Scene Graph Analysis. - Chaoyi Zhang; Jianhui Yu; Yang Song 001; Weidong Cai 001 (CVPR, 2021)

Walk in the Cloud: Learning Curves for Point Clouds Shape Analysis. - Tiange Xiang; Chaoyi Zhang; Yang Song 001; Jianhui Yu; Weidong Cai 001 (ICCV, 2021)

Iterative Subnetwork With Linear Hierarchical Ordering for Human Pose Estimation. - Shek Wai Chu; Chaoyi Zhang; Yang Song 001; Tom Weidong Cai (ICIP, 2021)

ICE-GAN: Identity-Aware and Capsule-Enhanced GAN with Graph-Based Reasoning for Micro-Expression Recognition and Synthesis. - Jianhui Yu; Chaoyi Zhang; Yang Song 001; Weidong Cai 001 (IJCNN, 2021)

Celltrack R-CNN: A Novel End-To-End Deep Neural Network For Cell Segmentation And Tracking In Microscopy Images. - Yuqian Chen; Yang Song 001; Chaoyi Zhang; Fan Zhang 013; Lauren O'Donnell; Wojciech Chrzanowski; Weidong Cai 001 (ISBI, 2021)

Single Neuron Segmentation Using Graph-Based Global Reasoning with Auxiliary Skeleton Loss from 3D Optical Microscope Images. - Heng Wang 007; Yang Song 001; Chaoyi Zhang; Jianhui Yu; Siqi Liu 001; Hanchuan Peng; Tom Weidong Cai (ISBI, 2021)

Deep Fiber Clustering: Anatomically Informed Unsupervised Deep Learning for Fast and Effective White Matter Parcellation. - Yuqian Chen; Chaoyi Zhang; Yang Song 001; Nikos Makris; Yogesh Rathi; Weidong Cai 001; Fan Zhang 013; Lauren J. O'Donnell (MICCAI (7), 2021)

LG-Net: Lesion Gate Network for Multiple Sclerosis Lesion Inpainting. - Zihao Tang; Mariano Cabezas; Dongnan Liu; Michael Barnett 006; Weidong Cai 001; Chenyu Wang 001 (MICCAI (7), 2021)

BiX-NAS: Searching Efficient Bi-directional Architecture for Medical Image Segmentation. - Xinyi Wang; Tiange Xiang; Chaoyi Zhang; Yang Song 001; Dongnan Liu; Heng Huang; Weidong Cai 001 (MICCAI (1), 2021)

Voxel-Wise Cross-Volume Representation Learning for 3D Neuron Reconstruction. - Heng Wang 007; Chaoyi Zhang; Jianhui Yu; Yang Song 001; Siqi Liu 001; Wojciech Chrzanowski; Weidong Cai 001 (MLMI@MICCAI, 2021)

Partial Graph Reasoning for Neural Network Regularization. - Tiange Xiang; Chaoyi Zhang; Yang Song 001; Siqi Liu 001; Hongliang Yuan; Tom Weidong Cai (CoRR, 2021)

Boundary-aware Graph Reasoning for Semantic Segmentation. - Haoteng Tang; Haozhe Jia; Weidong Cai 001; Heng Huang; Yong Xia 001; Liang Zhan (CoRR, 2021)

PSGR: Pixel-wise Sparse Graph Reasoning for COVID-19 Pneumonia Segmentation in CT Images. - Haozhe Jia; Haoteng Tang; Guixiang Ma; Tom Weidong Cai; Heng Huang; Liang Zhan; Yong Xia 001 (CoRR, 2021)

In-painting Radiography Images for Unsupervised Anomaly Detection. - Tiange Xiang; Yongyi Lu; Alan L. Yuille; Chaoyi Zhang; Weidong Cai 001; Zongwei Zhou (CoRR, 2021)

3D Medical Point Transformer: Introducing Convolution to Attention Networks for Medical Point Cloud Analysis. - Jianhui Yu; Chaoyi Zhang; Heng Wang 007; Dingxin Zhang 001; Yang Song 001; Tiange Xiang; Dongnan Liu; Weidong Cai 001 (CoRR, 2021)

Development and Validation of an Unsupervised Feature Learning System for Leukocyte Characterization and Classification: A Multi-Hospital Study. - Hong Yan; Xuanyu Mao; Xu Yang; Yongquan Xia; Chengbin Wang; Junjun Wang; Rui Xia; Xuejing Xu; Zhiqiang Wang; Zhiyang Li; Xie Zhao; Yan Li; et al. (Int. J. Comput. Vis., 2021)

Panoptic Feature Fusion Net: A Novel Instance Segmentation Paradigm for Biomedical and Biological Images. - Dongnan Liu; Donghao Zhang; Yang Song 001; Heng Huang; Weidong Cai 001 (IEEE Trans. Image Process., 2021)

PDAM: A Panoptic-Level Feature Alignment Framework for Unsupervised Domain Adaptive Instance Segmentation in Microscopy Images. - Dongnan Liu; Donghao Zhang; Yang Song 001; Fan Zhang 013; Lauren O'Donnell; Heng Huang; Mei Chen; Weidong Cai 001 (IEEE Trans. Medical Imaging, 2021)

Unsupervised Domain Adaptive Fundus Image Segmentation with Few Labeled Source Data. - Qianbi Yu; Dongnan Liu; Chaoyi Zhang; Xinwen Zhang; Weidong Cai 001 (BMVC, 2022)

Channel-Position Self-Attention with Query Refinement Skeleton Graph Neural Network in Human Pose Estimation. - Shek Wai Chu; Chaoyi Zhang; Yang Song 001; Weidong Cai 001 (ICIP, 2022)

Spatiality-guided Transformer for 3D Dense Captioning on Point Clouds. - Heng Wang 007; Chaoyi Zhang; Jianhui Yu; Weidong Cai 001 (IJCAI, 2022)

Supwma: Consistent and Efficient Tractography Parcellation of Superficial White Matter with Deep Learning. - Tengfei Xue; Fan Zhang 013; Chaoyi Zhang; Yuqian Chen; Yang Song 001; Nikos Makris; Yogesh Rathi; Weidong Cai 001; Lauren J. O'Donnell (ISBI, 2022)

White Matter Tracts are Point Clouds: Neuropsychological Score Prediction and Critical Region Localization via Geometric Deep Learning. - Yuqian Chen; Fan Zhang 013; Chaoyi Zhang; Tengfei Xue; Leo R. Zekelman; Jianzhong He; Yang Song 001; Nikos Makris; Yogesh Rathi; Alexandra J. Golby; Weidong Cai 001; Lauren J. O'Donnell (MICCAI (1), 2022)

Domain Adaptive Nuclei Instance Segmentation and Classification via Category-Aware Feature Alignment and Pseudo-Labelling. - Canran Li; Dongnan Liu; Haoran Li; Zheng Zhang 006; Guangming Lu 002; Xiaojun Chang; Weidong Cai 001 (MICCAI (8), 2022)

Diffusion MRI Fibre Orientation Distribution Inpainting. - Zihao Tang; Xinyi Wang; Mariano Cabezas; Arkiev D'Souza; Fernando Calamante; Dongnan Liu; Michael Barnett 006; Chenyu Wang 001; Tom Weidong Cai (CDMRI@MICCAI, 2022)

TractoFormer: A Novel Fiber-Level Whole Brain Tractography Analysis Framework Using Spectral Embedding and Vision Transformers. - Fan Zhang 013; Tengfei Xue; Weidong Cai 001; Yogesh Rathi; Carl-Fredrik Westin; Lauren J. O'Donnell (MICCAI (1), 2022)

DFC: Anatomically Informed Fiber Clustering with Self-supervised Deep Learning for Fast and Effective Tractography Parcellation. - Yuqian Chen; Chaoyi Zhang; Tengfei Xue; Yang Song 001; Nikos Makris; Yogesh Rathi; Tom Weidong Cai; Fan Zhang 013; Lauren J. O'Donnell (CoRR, 2022)

MS Lesion Segmentation: Revisiting Weighting Mechanisms for Federated Learning. - Dongnan Liu; Mariano Cabezas; Dongang Wang; Zihao Tang; Lei Bai 001; Geng Zhan; Yuling Luo; Kain Kyle; Linda Ly; James Yu; Chun-Chien Shieh; Aria Nguyen; et al. (CoRR, 2022)

Towards Generalisable Audio Representations for Audio-Visual Navigation. - Shunqi Mao; Chaoyi Zhang; Heng Wang 007; Weidong Cai 001 (CoRR, 2022)

A Novel Supervised Contrastive Regression Framework for Prediction of Neurocognitive Measures Using Multi-Site Harmonized Diffusion MRI Tractography. - Tengfei Xue; Fan Zhang 013; Leo R. Zekelman; Chaoyi Zhang; Yuqian Chen; Suheyla Cetin Karayumak; Steven D. Pieper; William M. Wells III; Yogesh Rathi; Nikos Makris; Weidong Cai 001; Lauren J. O'Donnell (CoRR, 2022)

TW-BAG: Tensor-wise Brain-aware Gate Network for Inpainting Disrupted Diffusion Tensor Imaging. - Zihao Tang; Xinyi Wang; Lihaowen Zhu; Mariano Cabezas; Dongnan Liu; Michael Barnett 006; Weidong Cai 001; Chenyu Wang 001 (CoRR, 2022)

Deep-learning-based solution for data deficient satellite image segmentation. - Henry Wing Fung Yeung; Meng Zhou; Yuk Ying Chung; Grant Moule; Wayne Thompson; Wanli Ouyang; Weidong Cai 001; Mohammed Bennamoun (Expert Syst. Appl., 2022)

Towards bi-directional skip connections in encoder-decoder architectures and beyond. - Tiange Xiang; Chaoyi Zhang; Xinyi Wang; Yang Song 001; Dongnan Liu; Heng Huang; Weidong Cai 001 (Medical Image Anal., 2022)

Learning multi-scale synergic discriminative features for prostate image segmentation. - Haozhe Jia; Weidong Cai 001; Heng Huang; Yong Xia 001 (Pattern Recognit., 2022)

Multiple Sclerosis Lesion Analysis in Brain Magnetic Resonance Images: Techniques and Clinical Applications. - Yang Ma; Chaoyi Zhang; Mariano Cabezas; Yang Song 001; Zihao Tang; Dongnan Liu; Weidong Cai 001; Michael Barnett 006; Chenyu Wang 001 (IEEE J. Biomed. Health Informatics, 2022)

DSNet: A Dual-Stream Framework for Weakly-Supervised Gigapixel Pathology Image Analysis. - Tiange Xiang; Yang Song 001; Chaoyi Zhang; Dongnan Liu; Mei Chen; Fan Zhang 013; Heng Huang; Lauren O'Donnell; Weidong Cai 001 (IEEE Trans. Medical Imaging, 2022)

Rethinking Rotation Invariance with Point Cloud Registration. - Jianhui Yu; Chaoyi Zhang; Weidong Cai 001 (AAAI, 2023)

PaRot: Patch-Wise Rotation-Invariant Network via Feature Disentanglement and Pose Restoration. - Dingxin Zhang 001; Jianhui Yu; Chaoyi Zhang; Weidong Cai 001 (AAAI, 2023)

SQUID: Deep Feature In-Painting for Unsupervised Anomaly Detection. - Tiange Xiang; Yixiao Zhang 001; Yongyi Lu; Alan L. Yuille; Chaoyi Zhang; Weidong Cai 001; Zongwei Zhou (CVPR, 2023)

CelebV-Text: A Large-Scale Facial Text-Video Dataset. - Jianhui Yu; Hao Zhu; Liming Jiang 001; Chen Change Loy; Weidong Cai 001; Wayne Wu (CVPR, 2023)

Multi-modal Domain Adaptation for Text Visual Question Answering Tasks. - Zhiyuan Li; Dongnan Liu; Weidong Cai 001 (DICTA, 2023)

Understanding the Role of Saliency Maps for Biomarker Research in 3D Medical Imaging Classification. - Yixiong Shi; Chenyu Wang 001; Dongnan Liu; Weidong Cai 001; Mariano Cabezas (DICTA, 2023)

Taxonomy Adaptive Cross-Domain Adaptation in Medical Imaging via Optimization Trajectory Distillation. - Jianan Fan; Dongnan Liu; Hang Chang; Heng Huang; Mei Chen; Weidong Cai 001 (ICCV, 2023)

Unsupervised Domain Adaptation for Neuron Membrane Segmentation based on Structural Features. - Yuxiang An; Dongnan Liu; Weidong Cai 001 (ICME, 2023)

ASRCD: Adaptive Serial Relation-Based Model for Cognitive Diagnosis. - Zhuonan Liang; Dongnan Liu; Yuqing Yang; Caiyun Sun; Weidong Cai 001; Peng Fu 003 (ICONIP (14), 2023)

Precise Few-Shot Fat-Free Thigh Muscle Segmentation in T1-Weighted MRI. - Sheng Chen; Zihao Tang; Dongnan Liu; Ché Fornusek; Michael Barnett 006; Chenyu Wang 001; Mariano Cabezas; Weidong Cai 001 (ISBI, 2023)

Tractgraphcnn: Anatomically Informed Graph CNN for Classification Using Diffusion MRI Tractography. - Yuqian Chen; Fan Zhang 013; Leo R. Zekelman; Tengfei Xue; Chaoyi Zhang; Yang Song 001; Nikos Makris; Yogesh Rathi; Weidong Cai 001; Lauren J. O'Donnell (ISBI, 2023)

A Registration- and Uncertainty-Based Framework for White Matter Tract Segmentation with Only One Annotated Subject. - Hao Xu 042; Tengfei Xue; Dongnan Liu; Fan Zhang 013; Carl-Fredrik Westin; Ron Kikinis; Lauren J. O'Donnell; Weidong Cai 001 (ISBI, 2023)

A Deep Learning Framework for Estimating Multi-Fiber PICASO Model Parameters of Tissue Microstructure Using Diffusion MRI. - Tengfei Xue; Hazhar Sufi Karimi; William Consagra; Fan Zhang 013; Weidong Cai 001; Lauren J. O'Donnell; Lipeng Ning; Yogesh Rathi (ISBI, 2023)

SynthMix: Mixing Up Aligned Synthesis for Medical Cross-Modality Domain Adaptation. - Xinwen Zhang; Chaoyi Zhang; Dongnan Liu; Qianbi Yu; Weidong Cai 001 (ISBI, 2023)

A Deep Network for Explainable Prediction of Non-imaging Phenotypes Using Anatomical Multi-view Data. - Yuxiang Wei 004; Yuqian Chen; Tengfei Xue; Leo R. Zekelman; Nikos Makris; Yogesh Rathi; Weidong Cai 001; Fan Zhang 013; Lauren J. O'Donnell (CDMRI@MICCAI, 2023)

Topology Repairing of Disconnected Pulmonary Airways and Vessels: Baselines and a Dataset. - Ziqiao Weng; Jiancheng Yang; Dongnan Liu; Tom Weidong Cai (MICCAI (7), 2023)

TractCloud: Registration-Free Tractography Parcellation with a Novel Local-Global Streamline Point Cloud Representation. - Tengfei Xue; Yuqian Chen; Chaoyi Zhang; Alexandra J. Golby; Nikos Makris; Yogesh Rathi; Weidong Cai 001; Fan Zhang 013; Lauren J. O'Donnell (MICCAI (8), 2023)

PointNeuron: 3D Neuron Reconstruction via Geometry and Topology Learning of Point Clouds. - Runkai Zhao; Heng Wang 007; Chaoyi Zhang; Weidong Cai 001 (WACV, 2023)

Fiber Tract Shape Measures Inform Prediction of Non-Imaging Phenotypes. - Wan Liu 001; Yuqian Chen; Chuyang Ye; Nikos Makris; Yogesh Rathi; Weidong Cai 001; Fan Zhang 013; Lauren J. O'Donnell (CoRR, 2023)

ODM3D: Alleviating Foreground Sparsity for Enhanced Semi-Supervised Monocular 3D Object Detection. - Weijia Zhang; Dongnan Liu; Chao Ma 004; Weidong Cai 001 (CoRR, 2023)

Decompose to Adapt: Cross-Domain Object Detection Via Feature Disentanglement. - Dongnan Liu; Chaoyi Zhang; Yang Song 001; Heng Huang; Chenyu Wang 001; Michael Barnett 006; Tom Weidong Cai (IEEE Trans. Multim., 2023)

LFACon: Introducing Anglewise Attention to No-Reference Quality Assessment in Light Field Space. - Qiang Qu; Xiaoming Chen 006; Yuk Ying Chung; Weidong Cai 001 (IEEE Trans. Vis. Comput. Graph., 2023)

A convolutional neural network with pixel-wise sparse graph reasoning for COVID-19 lesion segmentation in CT images. - Haozhe Jia; Haoteng Tang; Guixiang Ma; Weidong Cai 001; Heng Huang; Liang Zhan; Yong Xia 001 (Comput. Biol. Medicine, 2023)

Superficial white matter analysis: An efficient point-cloud-based deep learning framework with supervised contrastive learning for consistent tractography parcellation across populations and dMRI acquisitions. - Tengfei Xue; Fan Zhang 013; Chaoyi Zhang; Yuqian Chen; Yang Song 001; Alexandra J. Golby; Nikos Makris; Yogesh Rathi; Weidong Cai 001; Lauren J. O'Donnell (Medical Image Anal., 2023)

Deep fiber clustering: Anatomically informed fiber clustering with self-supervised deep learning for fast and effective tractography parcellation. - Yuqian Chen; Chaoyi Zhang; Tengfei Xue; Yang Song 001; Nikos Makris; Yogesh Rathi; Tom Weidong Cai; Fan Zhang 013; Lauren J. O'Donnell (NeuroImage, 2023)

EV-LFV: Synthesizing Light Field Event Streams from an Event Camera and Multiple RGB Cameras. - Zhicheng Lu; Xiaoming Chen 006; Vera Yuk Ying Chung; Weidong Cai 001; Yiran Shen 001 (IEEE Trans. Vis. Comput. Graph., 2023)

V2A-Mapper: A Lightweight Solution for Vision-to-Audio Generation by Connecting Foundation Models. - Heng Wang 007; Jianbo Ma; Santiago Pascual; Richard Cartwright; Weidong Cai 001 (AAAI, 2024)

PaintHuman: Towards High-Fidelity Text-to-3D Human Texturing via Denoised Score Distillation. - Jianhui Yu; Hao Zhu; Liming Jiang 001; Chen Change Loy; Tom Weidong Cai; Wayne Wu (AAAI, 2024)

Enhancing Robustness to Noise Corruption for Point Cloud Recognition via Spatial Sorting and Set-Mixing Aggregation Module. - Dingxin Zhang 001; Jianhui Yu; Tengfei Xue; Chaoyi Zhang; Dongnan Liu; Weidong Cai 001 (ACCV (9), 2024)

Unsupervised dMRI Artifact Detection via Angular Resolution Enhancement and Cycle Consistency Learning. - Sheng Chen; Zihao Tang; Xinyi Wang; Chenyu Wang 001; Tom Weidong Cai (AI (2), 2024)

3DSSG-Cap: A Caption Enhanced Dataset for 3D Visual Grounding. - Yifan Wang; Chaoyi Zhang; Heng Wang 007; Tom Weidong Cai (AI (2), 2024)

Unsupervised Domain Adaptation for Tubular Structure Segmentation Across Different Anatomical Sources. - Yuxiang An; Dongnan Liu; Weidong Cai 001 (BMVC, 2024)

Rethinking Domain Adaptive Optic Disc and Cup Segmentation in Fundus Image through Dynamic Diffusion Flow. - Canran Li; Dongnan Liu; Weidong Cai 001 (BMVC, 2024)

Seeing Unseen: Discover Novel Biomedical Concepts via Geometry-Constrained Probabilistic Modeling. - Jianan Fan; Dongnan Liu; Hang Chang; Heng Huang; Mei Chen; Weidong Cai 001 (CVPR, 2024)

Device-Wise Federated Network Pruning. - Shangqian Gao; Junyi Li; Zeyu Zhang; Yanfu Zhang; Weidong Cai 001; Heng Huang (CVPR, 2024)

LaPA: Latent Prompt Assist Model for Medical Visual Question Answering. - Tiancheng Gu; Kaicheng Yang 002; Dongnan Liu; Weidong Cai 001 (CVPR Workshops, 2024)

EgoSG: Learning 3D Scene Graphs from Egocentric RGB-D Sequences. - Chaoyi Zhang; Xitong Yang; Ji Hou; Kris Kitani; Weidong Cai 001; Fu-Jen Chu (CVPR Workshops, 2024)

Multi-Source Unsupervised Domain Adaptation for Neuron Membrane Segmentation via Feature Enhancement. - Yuxiang An; Dongnan Liu; Weidong Cai 001 (DICTA, 2024)

DeepIcon: A Hierarchical Network for Layer-Wise Icon Vectorization. - Qi Bing; Chaoyi Zhang; Weidong Cai 001 (DICTA, 2024)

Revisiting Adaptive Cellular Recognition Under Domain Shifts: A Contextual Correspondence View. - Jianan Fan; Dongnan Liu; Canran Li; Hang Chang; Heng Huang; Filip Braet; Mei Chen; Tom Weidong Cai (ECCV (73), 2024)

Controllable Contextualized Image Captioning: Directing the Visual Narrative Through User-Defined Highlights. - Shunqi Mao; Chaoyi Zhang; Hang Su; Hwanjun Song; Igor Shalyminov; Weidong Cai 001 (ECCV (50), 2024)

RWKV-CLIP: A Robust Vision-Language Representation Learner. - Tiancheng Gu; Kaicheng Yang 002; Xiang An; Ziyong Feng; Dongnan Liu; Weidong Cai 001; Jiankang Deng (EMNLP, 2024)

Enhancing Advanced Visual Reasoning Ability of Large Language Models. - Zhiyuan Li; Dongnan Liu; Chaoyi Zhang; Heng Wang 007; Tengfei Xue; Weidong Cai 001 (EMNLP, 2024)

Enhancing Angular Resolution via Directionality Encoding and Geometric Constraints in Brain Diffusion Tensor Imaging. - Sheng Chen; Zihao Tang; Mariano Cabezas; Xinyi Wang; Arkiev D'Souza; Michael Barnett 006; Fernando Calamante; Weidong Cai 001; Chenyu Wang 001 (ICONIP (4), 2024)

Learning to Synthesize Graphics Programs for Geometric Artworks. - Qi Bing; Chaoyi Zhang; Weidong Cai 001 (ICPR (18), 2024)

Advancements in 3D Lane Detection Using LiDAR Point Clouds: From Data Collection to Model Development. - Runkai Zhao; Yuwen Heng; Heng Wang 007; Yuanda Gao; Shilei Liu; Changhao Yao; Jiawen Chen; Weidong Cai 001 (ICRA, 2024)

Cross-Domain Exemplars for Cell Counting. - Veena Dodballapur; Dongnan Liu; Yang Song 001; Weidong Cai 001 (ISBI, 2024)

Multi-Source-Free Domain Adaptation via Uncertainty-Aware Adaptive Distillation. - Yaxuan Song; Jianan Fan; Dongnan Liu; Weidong Cai 001 (ISBI, 2024)

GroupLearning: Label Noise Mitigation Through Multi-Expert Collaboration for Medical Image Analysis. - Qinyi Cao; Dongnan Liu; Jianan Fan; Weidong Cai 001 (IVCNZ, 2024)

Disentanglement-Based Unsupervised Domain Adaptation for Nuclei Instance Segmentation. - Jieting Long; Dongnan Liu; Zihao Tang; Weidong Cai 001 (IVCNZ, 2024)

Revisiting Surgical Instrument Segmentation Without Human Intervention: A Graph Partitioning View. - Mingyu Sheng; Jianan Fan; Dongnan Liu; Ron Kikinis; Tom Weidong Cai (MCHM@MM, 2024)

Accurate Fetal Head Descent Assessment During Labor Using Video Swin Transformer and Wavelet-Based Multitask Learning for 2024 MICCAI Challenge IUGC. - Jie Gan; Zhuonan Liang; Jianan Fan; Lisa Mcguire; Jillian Clarke; Weidong Cai 001 (IUGC@MICCAI, 2024)

Cross-Domain Fiber Cluster Shape Analysis for Language Performance Cognitive Score Prediction. - Yui Lo; Yuqian Chen; Dongnan Liu; Wan Liu 001; Leo R. Zekelman; Fan Zhang 013; Yogesh Rathi; Nikos Makris; Alexandra J. Golby; Weidong Cai 001; Lauren J. O'Donnell (CDMRI@MICCAI, 2024)

Symmetry Awareness Encoded Deep Learning Framework for Brain Imaging Analysis. - Yang Ma; Dongang Wang; Peilin Liu; Lynette Masters; Michael Barnett 006; Tom Weidong Cai; Chenyu Wang 001 (MICCAI (12), 2024)

SAT-Morph: Unsupervised Deformable Medical Image Registration Using Vision Foundation Models with Anatomically Aware Text Prompt. - Hao Xu 042; Tengfei Xue; Dongnan Liu; Fan Zhang 013; Carl-Fredrik Westin; Ron Kikinis; Lauren J. O'Donnell; Weidong Cai 001 (MedAGI@MICCAI, 2024)

Cross-View Consistency Regularisation for Knowledge Distillation. - Weijia Zhang; Dongnan Liu; Weidong Cai 001; Chao Ma 004 (ACM Multimedia, 2024)

LaneCMKT: Boosting Monocular 3D Lane Detection with Cross-Modal Knowledge Transfer. - Runkai Zhao; Heng Wang 007; Weidong Cai 001 (ACM Multimedia, 2024)

Exploring Annotation-free Image Captioning with Retrieval-augmented Pseudo Sentence Generation. - Zhiyuan Li; Dongnan Liu; Heng Wang 007; Chaoyi Zhang; Weidong Cai 001 (MMAsia, 2024)

Fibre Population-guided Pre-training for 3D Spatial Super-Resolution on Multimodal Brain Diffusion MR Imaging. - Zihao Tang; Xinyi Wang; Mariano Cabezas; Arkiev D'Souza; Michael Barnett 006; Fernando Calamante; Weidong Cai 001; Chenyu Wang 001 (MMAsia, 2024)

Complex Organ Mask Guided Radiology Report Generation. - Tiancheng Gu; Dongnan Liu; Zhiyuan Li; Weidong Cai 001 (WACV, 2024)

Alleviating Foreground Sparsity for Semi-Supervised Monocular 3D Object Detection. - Weijia Zhang; Dongnan Liu; Chao Ma 004; Tom Weidong Cai (WACV, 2024)

Improving multiple sclerosis lesion segmentation across clinical sites: A federated learning approach with noise-resilient training. - Lei Bai 001; Dongang Wang; Hengrui Wang; Michael Barnett 006; Mariano Cabezas; Weidong Cai 001; Fernando Calamante; Kain Kyle; Dongnan Liu; Linda Ly; Aria Nguyen; Chun-Chien Shieh; et al. (Artif. Intell. Medicine, 2024)

How Much Data are Enough? Investigating Dataset Requirements for Patch-Based Brain MRI Segmentation Tasks. - Dongang Wang; Peilin Liu; Hengrui Wang; Heidi Beadnall; Kain Kyle; Linda Ly; Mariano Cabezas; Geng Zhan; Ryan Sullivan; Tom Weidong Cai; Wanli Ouyang; Fernando Calamante; et al. (CoRR, 2024)

Boosting 3D Neuron Segmentation with 2D Vision Transformer Pre-trained on Natural Images. - Yik San Cheng; Runkai Zhao; Heng Wang 007; Hanchuan Peng; Weidong Cai 001 (CoRR, 2024)

TractGraphFormer: Anatomically Informed Hybrid Graph CNN-Transformer Network for Classification from Diffusion MRI Tractography. - Yuqian Chen; Fan Zhang 013; Meng Wang; Leo R. Zekelman; Suheyla Cetin Karayumak; Tengfei Xue; Chaoyi Zhang; Yang Song 001; Nikos Makris; Yogesh Rathi; Tom Weidong Cai; Lauren J. O'Donnell (CoRR, 2024)

Enhancing Robustness to Noise Corruption for Point Cloud Model via Spatial Sorting and Set-Mixing Aggregation Module. - Dingxin Zhang 001; Jianhui Yu; Tengfei Xue; Chaoyi Zhang; Dongnan Liu; Tom Weidong Cai (CoRR, 2024)

White Matter Geometry-Guided Score-Based Diffusion Model for Tissue Microstructure Imputation in Tractography Imaging. - Yui Lo; Yuqian Chen; Fan Zhang 013; Dongnan Liu; Leo R. Zekelman; Suheyla Cetin Karayumak; Yogesh Rathi; Tom Weidong Cai; Lauren J. O'Donnell (CoRR, 2024)

Multimodal Causal Reasoning Benchmark: Challenging Vision Large Language Models to Infer Causal Links Between Siamese Images. - Zhiyuan Li; Heng Wang 007; Dongnan Liu; Chaoyi Zhang; Ao Ma; Jieting Long; Tom Weidong Cai (CoRR, 2024)

The shape of the brain's connections is predictive of cognitive performance: an explainable machine learning study. - Yui Lo; Yuqian Chen; Dongnan Liu; Wan Liu 001; Leo R. Zekelman; Jarrett Rushmore; Fan Zhang 013; Yogesh Rathi; Nikos Makris; Alexandra J. Golby; Weidong Cai 001; Lauren J. O'Donnell (CoRR, 2024)

Cell as Point: One-Stage Framework for Efficient Cell Tracking. - Yaxuan Song; Jianan Fan; Heng Huang; Mei Chen; Tom Weidong Cai (CoRR, 2024)

Gotta Hear Them All: Sound Source Aware Vision to Audio Generation. - Wei Guo; Heng Wang 007; Jianbo Ma; Tom Weidong Cai (CoRR, 2024)

TractGeoNet: A geometric deep learning framework for pointwise analysis of tract microstructure to predict language assessment performance. - Yuqian Chen; Leo R. Zekelman; Chaoyi Zhang; Tengfei Xue; Yang Song 001; Nikos Makris; Yogesh Rathi; Alexandra J. Golby; Weidong Cai 001; Fan Zhang 013; Lauren J. O'Donnell (Medical Image Anal., 2024)

A review of image watermarking for identity protection and verification. - Sunpreet Sharma; Ju Jia Zou; Gu Fang; Pancham Shukla; Weidong Cai 001 (Multim. Tools Appl., 2024)

Learning to Generalize over Subpartitions for Heterogeneity-Aware Domain Adaptive Nuclei Segmentation. - Jianan Fan; Dongnan Liu; Hang Chang; Tom Weidong Cai (Int. J. Comput. Vis., 2024)

Exploiting Structural Consistency of Chest Anatomy for Unsupervised Anomaly Detection in Radiography Images. - Tiange Xiang; Yixiao Zhang 001; Yongyi Lu; Alan L. Yuille; Chaoyi Zhang; Tom Weidong Cai; Zongwei Zhou (IEEE Trans. Pattern Anal. Mach. Intell., 2024)

CLIP-CID: Efficient CLIP Distillation via Cluster-Instance Discrimination. - Kaicheng Yang 002; Tiancheng Gu; Xiang An; Haiqiang Jiang; Xiangzi Dai; Ziyong Feng; Tom Weidong Cai; Jiankang Deng (AAAI, 2025)

Multimodal Causal Reasoning Benchmark: Challenging Multimodal Large Language Models to Discern Causal Links Across Modalities. - Zhiyuan Li; Heng Wang 007; Dongnan Liu; Chaoyi Zhang; Ao Ma; Jieting Long; Weidong Cai 001 (ACL (Findings), 2025)

Medical Image Registration Meets Vision Foundation Model: Prototype Learning and Contour Awareness. - Hao Xu 042; Tengfei Xue; Jianan Fan; Dongnan Liu; Yuqian Chen; Fan Zhang 013; Carl-Fredrik Westin; Ron Kikinis; Lauren J. O'Donnell; Weidong Cai 001 (IPMI (1), 2025)

Dineuro: Distilling Knowledge from 2D Natural Images via Deformable Tubular Transferring Strategy for 3D Neuron Reconstruction. - Yik San Cheng; Runkai Zhao; Heng Wang 007; Hanchuan Peng; Yui Lo; Yuqian Chen; Lauren J. O'Donnell; Weidong Cai 001 (ISBI, 2025)

Sequential Spatial-Temporal Network for Interpretable Automatic Ultrasonic Assessment of Fetal Head During Labor. - Jie Gan; Zhuonan Liang; Jianan Fan; Lisa Mcguire; Caterina Watson; Jacqueline Spurway; Jillian Clarke; Weidong Cai 001 (ISBI, 2025)

TractShapeNet: Efficient Multi-Shape Learning with 3D Tractography Point Clouds. - Yui Lo; Yuqian Chen; Dongnan Liu; Jon Haitz Legarreta; Leo R. Zekelman; Fan Zhang 013; Jarrett Rushmore; Yogesh Rathi; Nikos Makris; Alexandra J. Golby; Tom Weidong Cai; Lauren J. O'Donnell (ISBI, 2025)

UFREE: Unified Fiber Orientation Distribution Resolution Enhancement. - Xinyi Wang; Kunze Wang; Zihao Tang; Mariano Cabezas; Chenyu Wang 001; Tom Weidong Cai (ISBI, 2025)

Efficient 4D fMRI ASD Classification using Spatial-Temporal-Omics-Based Learning Framework. - Ziqiao Weng; Tom Weidong Cai; Bo Zhou (ISBI, 2025)

ORID: Organ-Regional Information Driven Framework for Radiology Report Generation. - Tiancheng Gu; Kaicheng Yang 002; Xiang An; Ziyong Feng; Dongnan Liu; Tom Weidong Cai (WACV, 2025)

AMNCutter: Affinity-Attention-Guided Multi-View Normalized Cutter for Unsupervised Surgical Instrument Segmentation. - Mingyu Sheng; Jianan Fan; Dongnan Liu; Ron Kikinis; Weidong Cai 001 (WACV, 2025)

Dance any Beat: Blending Beats with Visuals in Dance Video Generation. - Xuanchen Wang; Heng Wang 007; Dongnan Liu; Weidong Cai 001 (WACV, 2025)

Diversity-Augmented Diffusion Network With LLM Assistance For Radiology Report Generation. - Jieting Long; Zhiyuan Li; Jianan Fan; Zhuonan Liang; Ao Ma; Henning Müller; Weidong Cai 001 (WWW (Companion Volume), 2025)

LLM-UM: The 1st Workshop on Large Language Model Using Multi-modal Data for User Modeling. - Zhicheng Lu; Mohammad Ali Moni; Yuk Ying Chung; Tom Weidong Cai; Xiaoming Chen 006 (WWW (Companion Volume), 2025)

Seek Inner: LLM-Enhanced Information Mining for Medical Visual Question Answering. - Ao Ma; Zhiyuan Li; Zhuonan Liang; Tiancheng Gu; Jianan Fan; Jieting Long; Henning Müller; Weidong Cai 001 (WWW (Companion Volume), 2025)

TractGraphFormer: Anatomically informed hybrid graph CNN-transformer network for interpretable sex and age prediction from diffusion MRI tractography. - Yuqian Chen; Fan Zhang 013; Meng Wang; Leo R. Zekelman; Suheyla Cetin Karayumak; Tengfei Xue; Chaoyi Zhang; Yang Song 001; Jarrett Rushmore; Nikos Makris; Yogesh Rathi; Weidong Cai 001; et al. (Medical Image Anal., 2025)

Contrastive Neuron Pruning for Backdoor Defense. - Yu Feng; Benteng Ma; Dongnan Liu; Yanning Zhang 001; Tom Weidong Cai; Yong Xia 001 (IEEE Trans. Image Process., 2025)

NVS-SQA: Exploring Self-Supervised Quality Representation Learning for Neurally Synthesized Scenes without References. - Qiang Qu; Yiran Shen 001; Xiaoming Chen 006; Yuk Ying Chung; Tom Weidong Cai; Tongliang Liu (CoRR, 2025)

RealSyn: An Effective and Scalable Multimodal Interleaved Document Transformation Paradigm. - Tiancheng Gu; Kaicheng Yang 002; Chaoyi Zhang; Yin Xie; Xiang An; Ziyong Feng; Dongnan Liu; Tom Weidong Cai; Jiankang Deng (CoRR, 2025)

TractCloud-FOV: Deep Learning-based Robust Tractography Parcellation in Diffusion MRI with Incomplete Field of View. - Yuqian Chen; Leo R. Zekelman; Yui Lo; Suheyla Cetin Karayumak; Tengfei Xue; Yogesh Rathi; Nikos Makris; Fan Zhang 013; Tom Weidong Cai; Lauren J. O'Donnell (CoRR, 2025)

VRM: Knowledge Distillation via Virtual Relation Matching. - Weijia Zhang; Fei Xie; Weidong Cai 001; Chao Ma 004 (CoRR, 2025)

MIRROR: Multi-Modal Pathological Self-Supervised Representation Learning via Modality Alignment and Retention. - Tianyi Wang; Jianan Fan; Dingxin Zhang 001; Dongnan Liu; Yong Xia 001; Heng Huang; Tom Weidong Cai (CoRR, 2025)

CA-W3D: Leveraging Context-Aware Knowledge for Weakly Supervised Monocular 3D Detection. - Chupeng Liu; Runkai Zhao; Weidong Cai 001 (CoRR, 2025)

MultiCo3D: Multi-Label Voxel Contrast for One-Shot Incremental Segmentation of 3D Neuroimages. - Hao Xu 042; Tengfei Xue; Dongnan Liu; Yuqian Chen; Fan Zhang 013; Carl-Fredrik Westin; Ron Kikinis; Lauren J. O'Donnell; Weidong Cai 001 (CoRR, 2025)

Stealthy Patch-Wise Backdoor Attack in 3D Point Cloud via Curvature Awareness. - Yu Feng; Dingxin Zhang 001; Runkai Zhao; Yong Xia 001; Heng Huang; Tom Weidong Cai (CoRR, 2025)

Through the Magnifying Glass: Adaptive Perception Magnification for Hallucination-Free VLM Decoding. - Shunqi Mao; Chaoyi Zhang; Weidong Cai 001 (CoRR, 2025)

FedSKD: Aggregation-free Model-heterogeneous Federated Learning using Multi-dimensional Similarity Knowledge Distillation. - Ziqiao Weng; Weidong Cai 001; Bo Zhou (CoRR, 2025)

HFBRI-MAE: Handcrafted Feature Based Rotation-Invariant Masked Autoencoder for 3D Point Cloud Analysis. - Xuanhua Yin; Dingxin Zhang 001; Jianhui Yu; Weidong Cai 001 (CoRR, 2025)

Breaking the Modality Barrier: Universal Embedding Learning with Multimodal LLMs. - Tiancheng Gu; Kaicheng Yang 002; Ziyong Feng; Xingjun Wang; Yanzhao Zhang; Dingkun Long; Yingda Chen; Weidong Cai 001; Jiankang Deng (CoRR, 2025)

A Multimodal Deep Learning Approach for White Matter Shape Prediction in Diffusion MRI Tractography. - Yui Lo; Yuqian Chen; Dongnan Liu; Leo R. Zekelman; Jarrett Rushmore; Yogesh Rathi; Nikos Makris; Alexandra J. Golby; Fan Zhang 013; Tom Weidong Cai; Lauren J. O'Donnell (CoRR, 2025)

A Survey of 3D Reconstruction with Event Cameras. - Chuanzhi Xu; Haoxian Zhou; Langyi Chen; Haodong Chen; Ying Zhou; Vera Chung; Qiang Qu; Weidong Cai 001 (CoRR, 2025)

DeepMultiConnectome: Deep Multi-Task Prediction of Structural Connectomes Directly from Diffusion MRI Tractography. - Marcus J. Vroemen; Yuqian Chen; Yui Lo; Tengfei Xue; Tom Weidong Cai; Fan Zhang 013; Josien P. W. Pluim; Lauren J. O'Donnell (CoRR, 2025)

LLM-Enhanced Rapid-Reflex Async-Reflect Embodied Agent for Real-Time Decision-Making in Dynamically Changing Environments. - Yangqing Zheng; Shunqi Mao; Dingxin Zhang 001; Tom Weidong Cai (CoRR, 2025)

On the Theory of Conditional Feature Alignment for Unsupervised Domain-Adaptive Counting. - Zhuonan Liang; Dongnan Liu; Jianan Fan; Yaxuan Song; Qiang Qu; Yu Yao; Peng Fu 003; Tom Weidong Cai (CoRR, 2025)

Ctrl-Z Sampling: Diffusion Sampling with Controlled Random Zigzag Explorations. - Shunqi Mao; Wei Guo; Chaoyi Zhang; Weidong Cai 001 (CoRR, 2025)

Gene-DML: Dual-Pathway Multi-Level Discrimination for Gene Expression Prediction from Histopathology Images. - Yaxuan Song; Jianan Fan; Hang Chang; Tom Weidong Cai (CoRR, 2025)

ScSAM: Debiasing Morphology and Distributional Variability in Subcellular Semantic Segmentation. - Bo Fang; Jianan Fan; Dongnan Liu; Hang Chang; Gerald J. Shami; Filip Braet; Weidong Cai 001 (CoRR, 2025)

ChoreoMuse: Robust Music-to-Dance Video Generation with Style Transfer and Beat-Adherent Motion. - Xuanchen Wang; Heng Wang 007; Weidong Cai 001 (CoRR, 2025)

From Promise to Practical Reality: Transforming Diffusion MRI Analysis with Fast Deep Learning Enhancement. - Xinyi Wang; Michael Barnett 006; Frederique Boonstra; Yael Barnett; Mariano Cabezas; Arkiev D'Souza; Matthew C. Kiernan; Kain Kyle; Meng Law; Lynette Masters; Zihao Tang; Stephen Tisch; et al. (CoRR, 2025)