Integration of heterogeneous expression data sets extends the role of the retinol pathway in diabetes and insulin resistance. - Peter J. Park; Sek Won Kong; Toma Tebaldi; Weil R. Lai; Simon Kasif; Isaac S. Kohane (Bioinform., 2009)

Computational and experimental detection of uncoupling between transcriptome and translatome changes of gene expression. - Toma Tebaldi (2010)

AURA: Atlas of UTR Regulatory Activity. - Erik Dassi; A. Malossini; Angela Re; Tommaso Mazza; Toma Tebaldi; Luigi Caputi; Alessandro Quattrone (Bioinform., 2012)

tRanslatome: an R/Bioconductor package to portray translational control. - Toma Tebaldi; Erik Dassi; Galena Kostoska; Gabriella Viero; Alessandro Quattrone (Bioinform., 2014)

RNAcommender: genome-wide recommendation of RNA-protein interactions. - Gianluca Corrado; Toma Tebaldi; Fabrizio Costa; Paolo Frasconi; Andrea Passerini (Bioinform., 2016)

riboWaltz: Optimization of ribosome P-site positioning in ribosome profiling data. - Fabio Lauria; Toma Tebaldi; Paola Bernabò; Ewout J. N. Groen; Thomas H. Gillingwater; Gabriella Viero (PLoS Comput. Biol., 2018)

A Computing System for Discovering Causal Relationships Among Human Genes to Improve Drug Repositioning. - Enrico Blanzieri; Toma Tebaldi; Valter Cavecchia; Francesco Asnicar; Luca Masera; Gabriele Tomé; Eleonora Nigro; Enrica Colasurdo; Matteo Ciciani; Chiara Mazzoni; Stefania Pilati (IEEE Trans. Emerg. Top. Comput., 2021)