Multi-agent Based Analysis of Financial Data. - Tomás Tokár; Denis Horváth; Michal Hnatic (MMCP, 2011)

Machine Learning for In Silico Modeling of Tumor Growth. - Fleur Jeanquartier; Claire Jean-Quartier; Max Kotlyar; Tomás Tokár; Anne-Christin Hauschild; Igor Jurisica; Andreas Holzinger (Machine Learning for Health Informatics, 2016)

Data-driven medicine: promise and challenges. - Tomás Tokár; Igor Jurisica; Naomi P. Visanji; Christian Veillette (CASCON, 2018)

mirDIP 4.1 - integrative database of human microRNA target predictions. - Tomás Tokár; Chiara Pastrello; Andrea E. M. Rossos; Mark Abovsky; Anne-Christin Hauschild; Mike Tsay; Richard Lu; Igor Jurisica (Nucleic Acids Res., 2018)

GSOAP: a tool for visualization of gene set over-representation analysis. - Tomás Tokár; Chiara Pastrello; Igor Jurisica (Bioinform., 2020)

miRAnno - network-based functional microRNA annotation. - Tomás Tokár; Chiara Pastrello; Mark Abovsky; Sara Rahmati; Igor Jurisica (Bioinform., 2022)

ICE-T: Interactions-aware Cross-column Contrastive Embedding for Heterogeneous Tabular Datasets. - Tomás Tokár; Scott Sanner (AAAI, 2025)