Assessing Molecular Docking Tools for Relative Biological Activity Prediction: A Case Study of Triazole HIV-1 NNRTIs. - Tomasz Fraczek; Agata Siwek; Piotr Paneth (J. Chem. Inf. Model., 2013)

Simulation-Based Algorithm for Two-Dimensional Chemical Structure Diagram Generation of Complex Molecules and Ligand-Protein Interactions. - Tomasz Fraczek (J. Chem. Inf. Model., 2016)

Target-Aware Drug Activity Model: A Deep Learning Approach to Virtual HTS. - Szymon Czaplak; Tomasz Fraczek; Fabrizio Ambrogi; Michal Kmicikiewicz; Jörg Wichard; Anna Karawajczyk (ICANN (10), 2024)