CoV2K: A Knowledge Base of SARS-CoV-2 Variant Impacts. - Ruba Al Khalaf; Tommaso Alfonsi; Stefano Ceri; Anna Bernasconi 002 (RCIS, 2021)

EpiSurf: metadata-driven search server for analyzing amino acid changes within epitopes of SARS-CoV-2 and other viral species. - Anna Bernasconi 002; Luca Cilibrasi; Ruba Al Khalaf; Tommaso Alfonsi; Stefano Ceri; Pietro Pinoli; Arif Canakoglu (Database J. Biol. Databases Curation, 2021)

ViruSurf: an integrated database to investigate viral sequences. - Arif Canakoglu; Pietro Pinoli; Anna Bernasconi 002; Tommaso Alfonsi; Damianos P. Melidis; Stefano Ceri (Nucleic Acids Res., 2021)

Expressing Biological Problems with Logical Reasoning Languages. - Tommaso Alfonsi; Luigi Bellomarini; Anna Bernasconi 002; Stefano Ceri (RuleML+RR (Companion), 2022)

Genomic data integration and user-defined sample-set extraction for population variant analysis. - Tommaso Alfonsi; Anna Bernasconi 002; Arif Canakoglu; Marco Masseroli (BMC Bioinform., 2022)

Supporting data and code for "Data-driven recombination detection in viral genomes". - Tommaso Alfonsi; Anna Bernasconi 002; Matteo Chiara; Stefano Ceri (Zenodo, 2023)

Supporting data and code for "Data-driven recombination detection in viral genomes". - Tommaso Alfonsi; Anna Bernasconi 002; Matteo Chiara; Stefano Ceri (Zenodo, 2023)

SENSIBLE: Implementing Data-Driven Early Warning Systems for Future Viral Epidemics. - Anna Bernasconi 002; Matteo Chiara; Tommaso Alfonsi; Stefano Ceri (CAiSE Research Projects Exhibition, 2024)

Supporting data and code for "Data-driven recombination detection in viral genomes". - Tommaso Alfonsi; Anna Bernasconi 002; Matteo Chiara; Stefano Ceri (Zenodo, 2024)

Supporting data and code for "Data-driven recombination detection in viral genomes". - Tommaso Alfonsi; Anna Bernasconi 002; Matteo Chiara; Stefano Ceri (Zenodo, 2024)

Supporting data and code for "Data-driven recombination detection in viral genomes". - Tommaso Alfonsi; Anna Bernasconi 002; Matteo Chiara; Stefano Ceri (Zenodo, 2024)

Supporting data and code for "Multi-scale early spillover warnings for influenza A viruses". - Tommaso Alfonsi; Anna Bernasconi 002; Matteo Chiara; Stefano Ceri (Zenodo, 2025)

Supporting data and code for "Multi-scale early spillover warnings for influenza A viruses". - Tommaso Alfonsi; Anna Bernasconi 002; Matteo Chiara; Stefano Ceri (Zenodo, 2025)