Segmentation of Focal Cortical Dysplasia Lesions Using a Feature-Based Level Set. - Olivier Colliot; Tommaso Mansi; Neda Bernasconi; V. Naessens; D. Klironomos; Andrea Bernasconi (MICCAI, 2005)

Improved segmentation of focal cortical dysplasia lesions on MRI using expansion towards cortical boundaries. - Olivier Colliot; Tommaso Mansi; Pierre Besson; Neda Bernasconi; Andrea Bernasconi (ISBI, 2006)

Segmentation of focal cortical dysplasia lesions on MRI using level set evolution. - Olivier Colliot; Tommaso Mansi; Neda Bernasconi; V. Naessens; D. Klironomos; Andrea Bernasconi (NeuroImage, 2006)

An Integrated Platform for Dynamic Cardiac Simulation and Image Processing: Application to Personalised Tetralogy of Fallot Simulation. - Nicolas Toussaint; Tommaso Mansi; Hervé Delingette; Nicholas Ayache; Maxime Sermesant (VCBM, 2008)

Virtual Pulmonary Valve Replacement Interventions with a Personalised Cardiac Electromechanical Model. - Tommaso Mansi; Barbara André; Michael Lynch; Maxime Sermesant; Hervé Delingette; Younes Boudjemline; Nicholas Ayache (Recent Advances in the 3D Physiological Human, 2009)

Physically-Constrained Diffeomorphic Demons for the Estimation of 3D Myocardium Strain from Cine-MRI. - Tommaso Mansi; Jean-Marc Peyrat; Maxime Sermesant; Hervé Delingette; Julie Blanc; Younes Boudjemline; Nicholas Ayache (FIMH, 2009)

Characterization of Post-infarct Scars in a Porcine Model - A Combined Experimental and Theoretical Study. - Mihaela Pop; Maxime Sermesant; Tommaso Mansi; Eugene Crystal; Jay Detsky; Yuesong Yang; Paul Fefer; Elliot R. McVeigh; Alexander Dick; Nicholas Ayache; Graham A. Wright (FIMH, 2009)

Personalised Electromechanical Model of the Heart for the Prediction of the Acute Effects of Cardiac Resynchronisation Therapy. - Maxime Sermesant; Florence Billet; Radomír Chabiniok; Tommaso Mansi; Phani Chinchapatnam; Philippe Moireau; Jean-Marc Peyrat; Kawal S. Rhode; Matthew Ginks; Pier Lambiase; Simon R. Arridge; Hervé Delingette; et al. (FIMH, 2009)

A Statistical Model of Right Ventricle in Tetralogy of Fallot for Prediction of Remodelling and Therapy Planning. - Tommaso Mansi; Stanley Durrleman; Boris C. Bernhardt; Maxime Sermesant; Hervé Delingette; Ingmar Voigt; Philipp Lurz; Andrew Mayall Taylor; Julie Blanc; Younes Boudjemline; Xavier Pennec; Nicholas Ayache (MICCAI (1), 2009)

LogDemons Revisited: Consistent Regularisation and Incompressibility Constraint for Soft Tissue Tracking in Medical Images. - Tommaso Mansi; Xavier Pennec; Maxime Sermesant; Hervé Delingette; Nicholas Ayache (MICCAI (2), 2010)

Atlas-Based Reduced Models of Blood Flows for Fast Patient-Specific Simulations. - Kristin McLeod; Alfonso Caiazzo; Miguel A. Fernández; Tommaso Mansi; Irene E. Vignon-Clementel; Maxime Sermesant; Xavier Pennec; Younes Boudjemline; Jean-Frédéric Gerbeau (STACOM/CESC, 2010)

Cardiac Motion Estimation Using a ProActive Deformable Model: Evaluation and Sensitivity Analysis. - Ken C. L. Wong; Florence Billet; Tommaso Mansi; Radomír Chabiniok; Maxime Sermesant; Hervé Delingette; Nicholas Ayache (STACOM/CESC, 2010)

Image-based physiological and statistical models of the heart: application to tetralogy of Fallot. (Modèles physiologiques et statistiques du cœur guidés par imagerie médicale : application à la tétralogie de Fallot). - Tommaso Mansi (2010)

A 3D MRI-Based Cardiac Computer Model to Study Arrhythmia and Its In-vivo Experimental Validation. - Mihaela Pop; Maxime Sermesant; Jean-Marc Peyrat; Eugene Crystal; Sudip Ghate; Tommaso Mansi; Ilan Lashevsky; Beiping Qiang; Elliot R. McVeigh; Nicholas Ayache; Graham A. Wright (FIMH, 2011)

Patient-Specific Model of Left Heart Anatomy, Dynamics and Hemodynamics from 4D TEE: A First Validation Study. - Ingmar Voigt; Tommaso Mansi; Viorel Mihalef; Razvan Ioan Ionasec; Anna Calleja; Etienne Assoumou Mengue; Puneet Sharma; Helene Houle; Bogdan Georgescu; Joachim Hornegger; Dorin Comaniciu (FIMH, 2011)

Model-Based Fusion of Multi-modal Volumetric Images: Application to Transcatheter Valve Procedures. - Sasa Grbic; Razvan Ioan Ionasec; Yang Wang 001; Tommaso Mansi; Bogdan Georgescu; Matthias John 001; Jan M. Boese; Yefeng Zheng 001; Nassir Navab; Dorin Comaniciu (MICCAI (1), 2011)

Vertex-Wise Shape Analysis of the Hippocampus: Disentangling Positional Differences from Volume Changes. - Hosung Kim; Tommaso Mansi; Andrea Bernasconi; Neda Bernasconi (MICCAI (2), 2011)

Robust Surface-Based Multi-template Automated Algorithm to Segment Healthy and Pathological Hippocampi. - Hosung Kim; Tommaso Mansi; Neda Bernasconi; Andrea Bernasconi (MICCAI (3), 2011)

Towards Patient-Specific Finite-Element Simulation of MitralClip Procedure. - Tommaso Mansi; Ingmar Voigt; Etienne Assoumou Mengue; Razvan Ioan Ionasec; Bogdan Georgescu; Thilo Noack; Joerg Seeburger; Dorin Comaniciu (MICCAI (1), 2011)

An Incompressible Log-Domain Demons Algorithm for Tracking Heart Tissue. - Kristin McLeod; Adityo Prakosa; Tommaso Mansi; Maxime Sermesant; Xavier Pennec (STACOM, 2011)

EP Challenge - STACOM'11: Forward Approaches to Computational Electrophysiology Using MRI-Based Models and In-Vivo CARTO Mapping in Swine Hearts. - Mihaela Pop; Maxime Sermesant; Tommaso Mansi; Eugene Crystal; Sudip Ghate; Jatin Relan; Charles Pierre; Yves Coudière; Jennifer Barry; Ilan Lashevsky; Beiping Qiang; Elliot R. McVeigh; et al. (STACOM, 2011)

Robust Physically-Constrained Modeling of the Mitral Valve and Subvalvular Apparatus. - Ingmar Voigt; Tommaso Mansi; Razvan Ioan Ionasec; Etienne Assoumou Mengue; Helene Houle; Bogdan Georgescu; Joachim Hornegger; Dorin Comaniciu (MICCAI (3), 2011)

iLogDemons: A Demons-Based Registration Algorithm for Tracking Incompressible Elastic Biological Tissues. - Tommaso Mansi; Xavier Pennec; Maxime Sermesant; Hervé Delingette; Nicholas Ayache (Int. J. Comput. Vis., 2011)

Correspondence Between Simple 3-D MRI-Based Computer Models and In-Vivo EP Measurements in Swine With Chronic Infarctions. - Mihaela Pop; Maxime Sermesant; Tommaso Mansi; Eugene Crystal; Sudip Ghate; Jean-Marc Peyrat; Ilan Lashevsky; Beiping Qiang; Elliot R. McVeigh; Nicholas Ayache; Graham A. Wright (IEEE Trans. Biomed. Eng., 2011)

A Statistical Model for Quantification and Prediction of Cardiac Remodelling: Application to Tetralogy of Fallot. - Tommaso Mansi; Ingmar Voigt; Benedetta Leonardi; Xavier Pennec; Stanley Durrleman; Maxime Sermesant; Herve Delingette; Andrew Mayall Taylor; Younes Boudjemline; Giacomo Pongiglione; Nicholas Ayache (IEEE Trans. Medical Imaging, 2011)

Patient-specific finite-element simulation of respiratory mechanics for radiotherapy guidance, a first evaluation study. - Bernhard Fuerst; Tommaso Mansi; Parmeshwar Khurd; Jingdan Zhang; Jérôme Declerck; Thomas Boettger; Nassir Navab; John E. Bayouth; Ali Kamen (ISBI, 2012)

Data-driven computational models of heart anatomy, mechanics and hemodynamics: An integrated framework. - Tommaso Mansi; Viorel Mihalef; Puneet Sharma; Bogdan Georgescu; Xudong Zheng; Saikiran Rapaka; Ali Kamen; Derliz Mereles; Henning Steen; Benjamin Meder; Hugo A. Katus; Dorin Comaniciu (ISBI, 2012)

A Personalized Biomechanical Model for Respiratory Motion Prediction. - Bernhard Fuerst; Tommaso Mansi; Jianwen Zhang; Parmeshwar Khurd; Jérôme Declerck; Thomas Boettger; Nassir Navab; John E. Bayouth; Dorin Comaniciu; Ali Kamen (MICCAI (3), 2012)

In vivo Contact EP Data and ex vivo MR-Based Computer Models: Registration and Model-Dependent Errors. - Mihaela Pop; Maxime Sermesant; Roey Flor; Charles Pierre; Tommaso Mansi; Samuel O. Oduneye; Jennifer Barry; Yves Coudière; Eugene Crystal; Nicholas Ayache; Graham A. Wright (STACOM, 2012)

LBM-EP: Lattice-Boltzmann Method for Fast Cardiac Electrophysiology Simulation from 3D Images. - Saikiran Rapaka; Tommaso Mansi; Bogdan Georgescu; Mihaela Pop; Graham A. Wright; Ali Kamen; Dorin Comaniciu (MICCAI (2), 2012)

Surface-based multi-template automated hippocampal segmentation: Application to temporal lobe epilepsy. - Hosung Kim; Tommaso Mansi; Neda Bernasconi; Andrea Bernasconi (Medical Image Anal., 2012)

An integrated framework for finite-element modeling of mitral valve biomechanics from medical images: Application to MitralClip intervention planning. - Tommaso Mansi; Ingmar Voigt; Bogdan Georgescu; Xudong Zheng; Etienne Assoumou Mengue; Michael Hackl; Razvan Ioan Ionasec; Thilo Noack; Joerg Seeburger; Dorin Comaniciu (Medical Image Anal., 2012)

Construction of 3D MR image-based computer models of pathologic hearts, augmented with histology and optical fluorescence imaging to characterize action potential propagation. - Mihaela Pop; Maxime Sermesant; Garry Liu; Jatin Relan; Tommaso Mansi; Alan Soong; Jean-Marc Peyrat; Michael V. Truong; Paul Fefer; Elliot R. McVeigh; Herve Delingette; Alexander Dick; et al. (Medical Image Anal., 2012)

Patient-specific electromechanical models of the heart for the prediction of pacing acute effects in CRT: A preliminary clinical validation. - Maxime Sermesant; Radomír Chabiniok; Phani Chinchapatnam; Tommaso Mansi; Florence Billet; Philippe Moireau; Jean-Marc Peyrat; K. Wong; Jatin Relan; Kawal S. Rhode; Matthew Ginks; Pier Lambiase; et al. (Medical Image Anal., 2012)

Data-Driven Reduction of a Cardiac Myofilament Model. - Tommaso Mansi; Bogdan Georgescu; Jagir Hussan; Peter J. Hunter; Ali Kamen; Dorin Comaniciu (FIMH, 2013)

From Medical Images to Fast Computational Models of Heart Electromechanics: An Integrated Framework towards Clinical Use. - Oliver Zettinig; Tommaso Mansi; Bogdan Georgescu; Saikiran Rapaka; Ali Kamen; Jan Haas; Karen S. Frese; Farbod Sedaghat-Hamedani; Elham Kayvanpour; Ali Amr; Stefan Hardt; Derliz Mereles; et al. (FIMH, 2013)

Advanced intervention planning for Transcatheter Aortic Valve Implantations (TAVI) from CT using volumetric models. - Sasa Grbic; Razvan Ioan Ionasec; Tommaso Mansi; Bogdan Georgescu; Fernando Vega Higuera; Nassir Navab; Dorin Comaniciu (ISBI, 2013)

Estimation of patient-specific material properties of the mitral valve using 4D Transesophageal Echocardiography. - Jingjing Kanik; Tommaso Mansi; Ingmar Voigt; Puneet Sharma; Razvan Ioan Ionasec; Dorin Comaniciu; James S. Duncan (ISBI, 2013)

Lattice Boltzmann Method for Fast Patient-Specific Simulation of Liver Tumor Ablation from CT Images. - Chloé Audigier; Tommaso Mansi; Hervé Delingette; Saikiran Rapaka; Viorel Mihalef; Puneet Sharma; Daniel Carnegie; Emad Boctor; Michael A. Choti; Ali Kamen; Dorin Comaniciu; Nicholas Ayache (MICCAI (3), 2013)

Image-Based Computational Models for TAVI Planning: From CT Images to Implant Deployment. - Sasa Grbic; Tommaso Mansi; Razvan Ioan Ionasec; Ingmar Voigt; Helene Houle; Matthias John 001; Max Schoebinger; Nassir Navab; Dorin Comaniciu (MICCAI (2), 2013)

Automatic Personalization of the Mitral Valve Biomechanical Model Based on 4D Transesophageal Echocardiography. - Jingjing Kanik; Tommaso Mansi; Ingmar Voigt; Puneet Sharma; Razvan Ioan Ionasec; Dorin Comaniciu; James S. Duncan (STACOM, 2013)

A Framework for the Pre-clinical Validation of LBM-EP for the Planning and Guidance of Ventricular Tachycardia Ablation. - Tommaso Mansi; Roy Beinart; Oliver Zettinig; Saikiran Rapaka; Bogdan Georgescu; Ali Kamen; Yoav Dori; M. Muz Zviman; Daniel A. Herzka; Henry R. Halperin; Dorin Comaniciu (STACOM, 2013)

Multi-modal Pipeline for Comprehensive Validation of Mitral Valve Geometry and Functional Computational Models. - Dominik Neumann; Sasa Grbic; Tommaso Mansi; Ingmar Voigt; Jean Pierre Rabbah; Andrew W. Siefert; Neelakantan Saikrishnan; Ajit P. Yoganathan; David D. Yuh; Razvan Ioan Ionasec (STACOM, 2013)

Biomechanically Driven Registration of Pre- to Intra-Operative 3D Images for Laparoscopic Surgery. - Ozan Oktay; Li Zhang 024; Tommaso Mansi; Peter Mountney; Philip Walter Mewes; Stéphane Nicolau; Luc Soler; Christophe Chefd'Hotel (MICCAI (2), 2013)

Fast Data-Driven Calibration of a Cardiac Electrophysiology Model from Images and ECG. - Oliver Zettinig; Tommaso Mansi; Bogdan Georgescu; Elham Kayvanpour; Farbod Sedaghat-Hamedani; Ali Amr; Jan Haas; Henning Steen; Benjamin Meder; Hugo A. Katus; Nassir Navab; Ali Kamen; et al. (MICCAI (1), 2013)

Benchmarking framework for myocardial tracking and deformation algorithms: An open access database. - Catalina Tobon-Gomez; Mathieu De Craene; Kristin McLeod; Lennart Tautz; Wenzhe Shi; Anja Hennemuth; Adityo Prakosa; H. Wang; Gerry Carr-White; Stam Kapetanakis; Anja Lutz; Volker Rasche; et al. (Medical Image Anal., 2013)

Automatic image-to-model framework for patient-specific electromechanical modeling of the heart. - Dominik Neumann; Tommaso Mansi; Sasa Grbic; Ingmar Voigt; Bogdan Georgescu; Elham Kayvanpour; Ali Amr; Farbod Sedaghat-Hamedani; Jan Haas; Hugo A. Katus; Benjamin Meder; Joachim Hornegger; et al. (ISBI, 2014)

Parameter Estimation for Personalization of Liver Tumor Radiofrequency Ablation. - Chloé Audigier; Tommaso Mansi; Hervé Delingette; Saikiran Rapaka; Viorel Mihalef; Daniel Carnegie; Emad Boctor; Michael A. Choti; Ali Kamen; Dorin Comaniciu; Nicholas Ayache (ABDI@MICCAI, 2014)

Multi-modal Validation Framework of Mitral Valve Geometry and Functional Computational Models. - Sasa Grbic; Thomas F. Easley; Tommaso Mansi; Charles H. Bloodworth; Eric L. Pierce; Ingmar Voigt; Dominik Neumann; Julian Krebs; David D. Yuh; Morten O. Jensen; Dorin Comaniciu; Ajit P. Yoganathan (STACOM, 2014)

Robust Image-Based Estimation of Cardiac Tissue Parameters and Their Uncertainty from Noisy Data. - Dominik Neumann; Tommaso Mansi; Bogdan Georgescu; Ali Kamen; Elham Kayvanpour; Ali Amr; Farbod Sedaghat-Hamedani; Jan Haas; Hugo A. Katus; Benjamin Meder; Joachim Hornegger; Dorin Comaniciu (MICCAI (2), 2014)

Robust Detection of Mitral Papillary Muscle from 4D Transesophageal Echocardiography. - Mihai Scutaru; Ingmar Voigt; Tommaso Mansi; Anand Tatpati; Razvan Ioan Ionasec; Helene Houle; Dorin Comaniciu (STACOM, 2014)

Estimation of Regional Electrical Properties of the Heart from 12-Lead ECG and Images. - Philipp Seegerer; Tommaso Mansi; Marie-Pierre Jolly; Dominik Neumann; Bogdan Georgescu; Ali Kamen; Elham Kayvanpour; Ali Amr; Farbod Sedaghat-Hamedani; Jan Haas; Hugo A. Katus; Benjamin Meder; et al. (STACOM, 2014)

Group-wise construction of reduced models for understanding and characterization of pulmonary blood flows from medical images. - Romain Guibert; Kristin McLeod; Alfonso Caiazzo; Tommaso Mansi; Miguel A. Fernández; Maxime Sermesant; Xavier Pennec; Irene E. Vignon-Clementel; Younes Boudjemline; Jean-Frédéric Gerbeau (Medical Image Anal., 2014)

Corrigendum to "Group-wise construction of reduced models for understanding and characterization of pulmonary blood flows from medical images" [Med. Image Anal. 18(2014) 63-82]. - Romain Guibert; Kristin McLeod; Alfonso Caiazzo; Tommaso Mansi; Miguel A. Fernández; Maxime Sermesant; Xavier Pennec; Irene E. Vignon-Clementel; Younes Boudjemline; Jean-Frédéric Gerbeau (Medical Image Anal., 2014)

Data-driven estimation of cardiac electrical diffusivity from 12-lead ECG signals. - Oliver Zettinig; Tommaso Mansi; Dominik Neumann; Bogdan Georgescu; Saikiran Rapaka; Philipp Seegerer; Elham Kayvanpour; Farbod Sedaghat-Hamedani; Ali Amr; Jan Haas; Henning Steen; Hugo A. Katus; et al. (Medical Image Anal., 2014)

Propagation of Myocardial Fibre Architecture Uncertainty on Electromechanical Model Parameter Estimation: A Case Study. - Roch Molléro; Dominik Neumann; Marc-Michel Rohé; Manasi Datar; Hervé Lombaert; Nicholas Ayache; Dorin Comaniciu; Olivier Ecabert; Marcello Chinali; Gabriele Rinelli; Xavier Pennec; Maxime Sermesant; et al. (FIMH, 2015)

Data-Driven Model Reduction for Fast, High Fidelity Atrial Electrophysiology Computations. - Huanhuan Yang; Tiziano Passerini; Tommaso Mansi; Dorin Comaniciu (FIMH, 2015)

Vito - A Generic Agent for Multi-physics Model Personalization: Application to Heart Modeling. - Dominik Neumann; Tommaso Mansi; Lucian Mihai Itu; Bogdan Georgescu; Elham Kayvanpour; Farbod Sedaghat-Hamedani; Jan Haas; Hugo A. Katus; Benjamin Meder; Stefan Steidl; Joachim Hornegger; Dorin Comaniciu (MICCAI (2), 2015)

Robust Live Tracking of Mitral Valve Annulus for Minimally-Invasive Intervention Guidance. - Ingmar Voigt; Mihai Scutaru; Tommaso Mansi; Bogdan Georgescu; Noha El-Zehiry; Helene Houle; Dorin Comaniciu (MICCAI (1), 2015)

Efficient Lattice Boltzmann Solver for Patient-Specific Radiofrequency Ablation of Hepatic Tumors. - Chloé Audigier; Tommaso Mansi; Herve Delingette; Saikiran Rapaka; Viorel Mihalef; Daniel Carnegie; Emad Boctor; Michael A. Choti; Ali Kamen; Nicholas Ayache; Dorin Comaniciu (IEEE Trans. Medical Imaging, 2015)

Patient-Specific Biomechanical Model for the Prediction of Lung Motion From 4-D CT Images. - Bernhard Fuerst; Tommaso Mansi; Francois Carnis; Martin Salzle; Jingdan Zhang; Jérôme Declerck; Thomas Boettger; John E. Bayouth; Nassir Navab; Ali Kamen (IEEE Trans. Medical Imaging, 2015)

An Artificial Agent for Anatomical Landmark Detection in Medical Images. - Florin C. Ghesu; Bogdan Georgescu; Tommaso Mansi; Dominik Neumann; Joachim Hornegger; Dorin Comaniciu (MICCAI (3), 2016)

Personalized Computer Simulation of Diastolic Function in Heart Failure. - Ali Amr; Elham Kayvanpour; Farbod Sedaghat-Hamedani; Tiziano Passerini; Viorel Mihalef; Alan Lai; Dominik Neumann; Bogdan Georgescu; Sebastian Buss; Derliz Mereles; Edgar Zitron; Andreas E. Posch; et al. (Genom. Proteom. Bioinform., 2016)

Shaping the future through innovations: From medical imaging to precision medicine. - Dorin Comaniciu; Klaus Engel; Bogdan Georgescu; Tommaso Mansi (Medical Image Anal., 2016)

A self-taught artificial agent for multi-physics computational model personalization. - Dominik Neumann; Tommaso Mansi; Lucian Mihai Itu; Bogdan Georgescu; Elham Kayvanpour; Farbod Sedaghat-Hamedani; Ali Amr; Jan Haas; Hugo A. Katus; Benjamin Meder; Stefan Steidl; Joachim Hornegger; et al. (Medical Image Anal., 2016)

An Artificial Agent for Robust Image Registration. - Rui Liao; Shun Miao; Pierre de Tournemire; Sasa Grbic; Ali Kamen; Tommaso Mansi; Dorin Comaniciu (AAAI, 2017)

Estimation of Local Conduction Velocity from Myocardium Activation Time: Application to Cardiac Resynchronization Therapy. - Thomas S. Pheiffer; David Soto-Iglesias; Yaroslav Nikulin; Tiziano Passerini; Julian Krebs; Marta Sitges; Antonio Berruezo; Oscar Camara 001; Tommaso Mansi (FIMH, 2017)

Robust Non-rigid Registration Through Agent-Based Action Learning. - Julian Krebs; Tommaso Mansi; Hervé Delingette; Li Zhang; Florin C. Ghesu; Shun Miao; Andreas K. Maier; Nicholas Ayache; Rui Liao; Ali Kamen (MICCAI (1), 2017)

Comprehensive preclinical evaluation of a multi-physics model of liver tumor radiofrequency ablation. - Chloé Audigier; Tommaso Mansi; Hervé Delingette; Saikiran Rapaka; Tiziano Passerini; Viorel Mihalef; Marie-Pierre Jolly; Raoul Pop; Michele Diana; Luc Soler; Ali Kamen; Dorin Comaniciu; et al. (Int. J. Comput. Assist. Radiol. Surg., 2017)

Personalized mitral valve closure computation and uncertainty analysis from 3D echocardiography. - Sasa Grbic; Thomas F. Easley; Tommaso Mansi; Charles H. Bloodworth; Eric L. Pierce; Ingmar Voigt; Dominik Neumann; Julian Krebs; David D. Yuh; Morten O. Jensen; Dorin Comaniciu; Ajit P. Yoganathan (Medical Image Anal., 2017)

Towards patient-specific modeling of mitral valve repair: 3D transesophageal echocardiography-derived parameter estimation. - Fan Zhang 009; Jingjing Kanik; Tommaso Mansi; Ingmar Voigt; Puneet Sharma; Razvan Ioan Ionasec; Lakshman Subrahmanyan; Ben A. Lin; Lissa Sugeng; David D. Yuh; Dorin Comaniciu; James S. Duncan (Medical Image Anal., 2017)

Dilated FCN for Multi-Agent 2D/3D Medical Image Registration. - Shun Miao; Sebastien Piat; Peter Walter Fischer; Ahmet Tuysuzoglu; Philip Walter Mewes; Tommaso Mansi; Rui Liao (AAAI, 2018)

Deep Convolutional Networks for Automated Detection of Epileptogenic Brain Malformations. - Ravnoor S. Gill; Seok-Jun Hong; Fatemeh Fadaie; Benoît Caldairou; Boris C. Bernhardt; Carmen Barba; Armin Brandt; Vanessa C. Coelho; Ludovico D'Incerti; Matteo Lenge; Mira Semmelroch; Fabrice Bartolomei; et al. (MICCAI (3), 2018)

Unsupervised Probabilistic Deformation Modeling for Robust Diffeomorphic Registration. - Julian Krebs; Tommaso Mansi; Boris Mailhé; Nicholas Ayache; Hervé Delingette (DLMIA/ML-CDS@MICCAI, 2018)

Task Driven Generative Modeling for Unsupervised Domain Adaptation: Application to X-ray Image Segmentation. - Yue Zhang 036; Shun Miao; Tommaso Mansi; Rui Liao (MICCAI (2), 2018)

3D/2D model-to-image registration by imitation learning for cardiac procedures. - Daniel Toth 001; Shun Miao; Tanja Kurzendorfer; Christopher A. Rinaldi; Rui Liao; Tommaso Mansi; Kawal S. Rhode; Peter Mountney (Int. J. Comput. Assist. Radiol. Surg., 2018)

Learning Structured Deformations using Diffeomorphic Registration. - Julian Krebs; Tommaso Mansi; Boris Mailhé; Nicholas Ayache; Hervé Delingette (CoRR, 2018)

Unsupervised Deformable Registration for Multi-modal Images via Disentangled Representations. - Chen Qin; Bibo Shi; Rui Liao; Tommaso Mansi; Daniel Rueckert; Ali Kamen (IPMI, 2019)

Probabilistic Motion Modeling from Medical Image Sequences: Application to Cardiac Cine-MRI. - Julian Krebs; Tommaso Mansi; Nicholas Ayache; Hervé Delingette (STACOM@MICCAI, 2019)

Learning a Probabilistic Model for Diffeomorphic Registration. - Julian Krebs; Hervé Delingette; Boris Mailhé; Nicholas Ayache; Tommaso Mansi (IEEE Trans. Medical Imaging, 2019)

Cycle Ynet: Semi-supervised Tracking of 3D Anatomical Landmarks. - Jianzhe Lin; Yue Zhang 036; Abdoul-aziz Amadou; Ingmar Voigt; Tommaso Mansi; Rui Liao (MLMI@MICCAI, 2020)

Graph Convolutional Regression of Cardiac Depolarization from Sparse Endocardial Maps. - Felix Meister; Tiziano Passerini; Chloé Audigier; Èric Lluch; Viorel Mihalef; Hiroshi Ashikaga; Andreas Maier 001; Henry R. Halperin; Tommaso Mansi (M&Ms and EMIDEC/STACOM@MICCAI, 2020)

A Bottom-Up Approach for Real-Time Mitral Valve Annulus Modeling on 3D Echo Images. - Yue Zhang 036; Abdoul-aziz Amadou; Ingmar Voigt; Viorel Mihalef; Helene Houle; Matthias John 001; Tommaso Mansi; Rui Liao (MICCAI (6), 2020)

Towards Automatic Manipulation of Intra-cardiac Echocardiography Catheter. - Young-Ho Kim; Jarrod Collins; Zhongyu Li; Ponraj Chinnadurai; Ankur Kapoor; C. Huie Lin; Tommaso Mansi (CoRR, 2020)

Unsupervised X-ray image segmentation with task driven generative adversarial networks. - Yue Zhang 036; Shun Miao; Tommaso Mansi; Rui Liao (Medical Image Anal., 2020)

Shape-adaptive Hysteresis Compensation for Tendon-driven Continuum Manipulators. - Young-Ho Kim; Tommaso Mansi (CoRR, 2021)

A Wide-area, Low-latency, and Power-efficient 6-DoF Pose Tracking System for Rigid Objects. - Young-Ho Kim; Ankur Kapoor; Tommaso Mansi; Ali Kamen (CoRR, 2021)

Non-Linear Hysteresis Compensation of a Tendon-Sheath-Driven Robotic Manipulator Using Motor Current. - Dong-Ho Lee; Young-Ho Kim; Jarrod Collins; Ankur Kapoor; Dong-Soo Kwon; Tommaso Mansi (IEEE Robotics Autom. Lett., 2021)

Learning a Generative Motion Model From Image Sequences Based on a Latent Motion Matrix. - Julian Krebs; Hervé Delingette; Nicholas Ayache; Tommaso Mansi (IEEE Trans. Medical Imaging, 2021)

Fast Automatic Liver Tumor Radiofrequency Ablation Planning via Learned Physics Model. - Felix Meister; Chloé Audigier; Tiziano Passerini; Èric Lluch; Viorel Mihalef; Andreas K. Maier; Tommaso Mansi (MICCAI (8), 2022)

Automatic planning of liver tumor thermal ablation using deep reinforcement learning. - Krishna Chaitanya; Chloé Audigier; Laura Elena Balascuta; Tommaso Mansi (MIDL, 2022)

A Multi-organ Point Cloud Registration Algorithm for Abdominal CT Registration. - Samuel Joutard; Thomas S. Pheiffer; Chloé Audigier; Patrick Wohlfahrt; Reuben Dorent; Sebastien Piat; Tom Vercauteren; Marc Modat; Tommaso Mansi (WBIR, 2022)

A comparative study on computational models of multi-electrode radiofrequency ablation of large liver tumors. - Chloé Audigier; Antonia Teodora Mohaiu; Amilcar Alzaga; Reto Bale; Tommaso Mansi (Int. J. Comput. Assist. Radiol. Surg., 2022)

Automated catheter tip repositioning for intra-cardiac echocardiography. - Young-Ho Kim; Jarrod Collins; Zhongyu Li; Ponraj Chinnadurai; Ankur Kapoor; C. Huie Lin; Tommaso Mansi (Int. J. Comput. Assist. Radiol. Surg., 2022)

EchoFM: A View-Independent Echocardiogram Model for the Detection of Pulmonary Hypertension. - Shreyas Fadnavis; Chaitanya Parmar; Nastaran Emaminejad; Alvaro Ulloa Cerna; Areez Malik; Mona Selej; Tommaso Mansi; Preston Dunnmon; Tarik Yardibi; Kristopher Standish; Pablo F. Damasceno (MICCAI (1), 2024)

Harnessing Temporal Information for Precise Frame-Level Predictions in Endoscopy Videos. - Pooya Mobadersany; Chaitanya Parmar; Pablo F. Damasceno; Shreyas Fadnavis; Krishna Chaitanya; Shilong Li; Evan Schwab; Jaclyn Xiao; Lindsey Surace; Tommaso Mansi; Gabriela Oana Cula; Louis Ghanem; et al. (MICCAI (6), 2024)

Arges: Spatio-Temporal Transformer for Ulcerative Colitis Severity Assessment in Endoscopy Videos. - Krishna Chaitanya; Pablo F. Damasceno; Shreyas Fadnavis; Pooya Mobadersany; Chaitanya Parmar; Emily Scherer; Natalia Zemlianskaia; Lindsey Surace; Louis Ghanem; Gabriela Oana Cula; Tommaso Mansi; Kristopher Standish (MLMI@MICCAI (2), 2024)

Cardiac ultrasound simulation for autonomous ultrasound navigation. - Abdoul-aziz Amadou; Laura Peralta Pereira; Paul Dryburgh; Paul Klein; Kaloian Petkov; Richard James Housden; Vivek Singh; Rui Liao; Young-Ho Kim; Florin-Cristian Ghesu; Tommaso Mansi; Ronak Rajani; et al. (CoRR, 2024)

SE(3)-Hyena Operator for Scalable Equivariant Learning. - Artem Moskalev; Mangal Prakash; Rui Liao; Tommaso Mansi (CoRR, 2024)

Beyond Sequence: Impact of Geometric Context for RNA Property Prediction. - Junjie Xu; Artem Moskalev; Tommaso Mansi; Mangal Prakash; Rui Liao (ICLR, 2025)

HELM: Hierarchical Encoding for mRNA Language Modeling. - Mehdi Yazdani-Jahromi; Mangal Prakash; Tommaso Mansi; Artem Moskalev; Rui Liao (ICLR, 2025)

InfoSEM: A Deep Generative Model with Informative Priors for Gene Regulatory Network Inference. - Tianyu Cui; Song-Jun Xu; Artem Moskalev; Shuwei Li; Tommaso Mansi; Mangal Prakash; Rui Liao (CoRR, 2025)

Geometric Hyena Networks for Large-scale Equivariant Learning. - Artem Moskalev; Mangal Prakash; Junjie Xu; Tianyu Cui; Rui Liao; Tommaso Mansi (CoRR, 2025)

BioLangFusion: Multimodal Fusion of DNA, mRNA, and Protein Language Models. - Amina Mollaysa; Artem Moskalev; Pushpak Pati; Tommaso Mansi; Mangal Prakash; Rui Liao (CoRR, 2025)

Multimodal Modeling of CRISPR-Cas12 Activity Using Foundation Models and Chromatin Accessibility Data. - Azim Dehghani Amirabad; Yanfei Zhang; Artem Moskalev; Sowmya Rajesh; Tommaso Mansi; Shuwei Li; Mangal Prakash; Rui Liao (CoRR, 2025)

TRIDENT: Tri-Modal Molecular Representation Learning with Taxonomic Annotations and Local Correspondence. - Feng Jiang; Mangal Prakash; Hehuan Ma; Jianyuan Deng; Yuzhi Guo; Amina Mollaysa; Tommaso Mansi; Rui Liao; Junzhou Huang (CoRR, 2025)