Mitochondria segmentation in electron microscopy volumes using deep convolutional neural network. - Ismail Oztel; Gozde Yolcu; Ilker Ersoy; Tommi A. White; Filiz Bunyak (BIBM, 2017)

Museed: A mobile image analysis application for plant seed morphometry. - Ke Gao; Tommi A. White; Kannappan Palaniappan; Michele Warmund; Filiz Bunyak (ICIP, 2017)

Automated Particle Picking in Cryo-Electron Micrographs using Deep Regression. - Nguyen P. Nguyen; Ilker Ersoy; Tommi A. White; Filiz Bunyak (BIBM, 2018)

Deep learning approaches in electron microscopy imaging for mitochondria segmentation. - Ismail Oztel; Gozde Yolcu; Ilker Ersoy; Tommi A. White; Filiz Bunyak (Int. J. Data Min. Bioinform., 2018)

SHREC 2020: Classification in cryo-electron tomograms. - Ilja Gubins; Marten L. Chaillet; Gijs van der Schot; Remco C. Veltkamp; Friedrich Förster; Yu Hao; Xiaohua Wan 001; Xuefeng Cui; Fa Zhang 001; Emmanuel Moebel; Xiao Wang 004; Daisuke Kihara; et al. (Comput. Graph., 2020)

SHREC 2021: Classification in Cryo-electron Tomograms. - Ilja Gubins; Marten L. Chaillet; Gijs van der Schot; M. Cristina Trueba; Remco C. Veltkamp; Friedrich Förster; Xiao Wang 004; Daisuke Kihara; Emmanuel Moebel; Nguyen P. Nguyen; Tommi A. White; Filiz Bunyak; et al. (3DOR, 2021)

Mitochondria Instance Segmentation in Electron Microscopy Image Volumes using 3D Deep Learning Networks. - Nguyen P. Nguyen; Tommi A. White; Filiz Bunyak (AIPR, 2021)

Brain midline shift detection and quantification by a cascaded deep network pipeline on non-contrast computed tomography scans. - Nguyen P. Nguyen; Youngjin Yoo; Andrei Chekkoury; Eva Eibenberger; Thomas J. Re; Jyotipriya Das; Abishek Balachandran; Yvonne W. Lui; Pina C. Sanelli; Thomas J. Schroeppel; Uttam Bodanapally; Savvas Nicolaou; et al. (ICCVW, 2021)

DRPnet: automated particle picking in cryo-electron micrographs using deep regression. - Nguyen P. Nguyen; Ilker Ersoy; Jacob Gotberg; Filiz Bunyak; Tommi A. White (BMC Bioinform., 2021)

Multi-Cloud Performance and Security Driven Federated Workflow Management. - Matthew Dickinson; Saptarshi Debroy; Prasad Calyam; Samaikya Valluripally; Yuanxun Zhang; Ronny Bazan Antequera; Trupti Joshi; Tommi A. White; Dong Xu 002 (IEEE Trans. Cloud Comput., 2021)