Integration and utilization of different visualization methods and devices in a structure-based drug design process. - Matti T. Gröhn; Tommi H. Nyrönen (Visualization and Data Analysis, 2003)

A structure-activity relationship study of catechol-O-methyltransferase inhibitors combining molecular docking and 3D QSAR methods. - Anu J. Tervo; Tommi H. Nyrönen; Toni Rönkkö; Antti Poso (J. Comput. Aided Mol. Des., 2003)

BODIL: a molecular modeling environment for structure-function analysis and drug design. - Jukka V. Lehtonen; Dan-Johan Still; Ville-Veikko Rantanen; Jan Ekholm; Dag Björklund; Zuhair Iftikhar; Mikko Huhtala; Susanna Repo; Antti Jussila; Jussi Jaakkola; Olli T. Pentikäinen; Tommi H. Nyrönen; et al. (J. Comput. Aided Mol. Des., 2004)

Comparing the Quality and Predictiveness between 3D QSAR Models Obtained from Manual and Automated Alignment. - Anu J. Tervo; Tommi H. Nyrönen; Toni Rönkkö; Antti Poso (J. Chem. Inf. Model., 2004)

SOMA - Workflow for Small Molecule Property Calculations on a Multiplatform Computing Grid. - Pekka T. Lehtovuori; Tommi H. Nyrönen (J. Chem. Inf. Model., 2006)

Computationally Identified Novel Diphenyl- and Phenylpyridine Androgen Receptor Antagonist Structures. - Annu A. Soderholm; Johanna Viiliainen; Pekka T. Lehtovuori; Hanna Eskelinen; Daniela Roell; Aria Baniahmad; Tommi H. Nyrönen (J. Chem. Inf. Model., 2008)

Bioinformatics training: a review of challenges, actions and support requirements. - Maria Victoria Schneider; James Watson; Teresa K. Attwood; Kristian Rother; Aidan Budd; Jennifer McDowall; Allegra Via; Pedro L. Fernandes; Tommi H. Nyrönen; Thomas Blicher; Philip Jones; Marie-Claude Blatter; et al. (Briefings Bioinform., 2010)

Delivering ICT infrastructure for biomedical research. - Tommi H. Nyrönen; Jarno Laitinen; Olli Tourunen; Danny Sternkopf; Risto Laurikainen; Per Öster; Pekka T. Lehtovuori; Timo A. Miettinen; Tomi Simonen; Teemu Perheentupa; Imre Vastrik; Olli-P. Kallioniemi; et al. (WICSA/ECSA Companion Volume, 2012)

Bioinformatics Training Network (BTN): a community resource for bioinformatics trainers. - Maria Victoria Schneider; Peter Walter; Marie-Claude Blatter; James Watson; Michelle D. Brazas; Kristian Rother; Aidan Budd; Allegra Via; Celia W. G. van Gelder; Joachim Jacob; Pedro L. Fernandes; Tommi H. Nyrönen; et al. (Briefings Bioinform., 2012)

Best practices in bioinformatics training for life scientists. - Allegra Via; Thomas Blicher; Erik Bongcam-Rudloff; Michelle D. Brazas; Catherine Brooksbank; Aidan Budd; Javier De Las Rivas; Jacqueline Dreyer; Pedro L. Fernandes; Celia W. G. van Gelder; Joachim Jacob; Rafael C. Jiménez; et al. (Briefings Bioinform., 2013)

iAnn: an event sharing platform for the life sciences. - Rafael C. Jiménez; Juan P. Albar; Jong Bhak; Marie-Claude Blatter; Thomas Blicher; Michelle D. Brazas; Catherine Brooksbank; Aidan Budd; Javier De Las Rivas; Jacqueline Dreyer; Marc A. van Driel; Michael J. Dunn; et al. (Bioinform., 2013)

Orchestrating differential data access for translational research: a pilot implementation. - Marco Brandizi; Olga Melnichuk; Raffael Bild; Florian Kohlmayer; Benedicto Rodriguez-Castro; Helmut Spengler; Klaus A. Kuhn; Wolfgang Kuchinke; Christian Ohmann; Timo Mustonen; Mikael Linden; Tommi H. Nyrönen; et al. (BMC Medical Informatics Decis. Mak., 2017)

Common ELIXIR Service for Researcher Authentication and Authorisation. - Mikael Linden; Michal Procházka; Ilkka Lappalainen; Dominik Bucik; Pavel Vyskocil; Martin Kuba; Sami Silén; Peter Belmann; Alexander Sczyrba; Steven J. Newhouse; Ludek Matyska; Tommi H. Nyrönen (F1000Research, 2018)

ECCB2024: The 23rd European Conference on Computational Biology. - Anu Kukkonen-Macchi; Sampsa Hautaniemi; Katharina F. Heil; Merja Heinäniemi; Lars Juhl Jensen; Sini Junttila; Lukas Käll; Asta Laiho; Peter Maccallum; Matti Nykter; Bengt Persson; Tomi Suomi; et al. (Bioinform., 2024)