A Knowledge Model for Analysis and Simulation of Regulatory Based on Information in Electronic Publications. - Andrey Rzhetsky; Tomohiro Koike; Sergey Kalachikov; Pauline Kra; Carol Friedman (AMIA, 1999)

A knowledge model for analysis and simulation of regulatory networks. - Andrey Rzhetsky; Tomohiro Koike; Sergey Kalachikov; Shawn M. Gomez; Michael Krauthammer; Sabina H. Kaplan; Pauline Kra; James J. Russo; Carol Friedman (Bioinform., 2000)

GeneWays: A System for Mining Text and for Integrating Data on Molecular Pathways. - Andrey Rzhetsky; Michael Krauthammer; Tomohiro Koike; Pauline Kra; Shawn M. Gomez; Hong Yu 001; Pablo Ariel Duboué; Wubin Weng; Stephen B. Johnson; Vasileios Hatzivassiloglou; Carol Friedman (German Conference on Bioinformatics, 2001)

GeneWays: a system for extracting, analyzing, visualizing, and integrating molecular pathway data. - Andrey Rzhetsky; Ivan Iossifov; Tomohiro Koike; Michael Krauthammer; Pauline Kra; Mitzi Morris; Hong Yu 001; Pablo Ariel Duboué; Wubin Weng; W. John Wilbur (J. Biomed. Informatics, 2004)