A Task Parallel Algorithm for Computing the Costs of All-Pairs Shortest Paths on the CUDA-Compatible GPU. - Tomohiro Okuyama; Fumihiko Ino; Kenichi Hagihara (ISPA, 2008)

Multilevel Modeling of Physiological Systems and Simulation Platform: PhysioDesigner, Flint and Flint K3 Service. - Yoshiyuki Asai; Takeshi Abe; Masao Okita; Tomohiro Okuyama; Nobukazu Yoshioka; Shigetoshi Yokoyama; Masaru Nagaku; Kenichi Hagihara; Hiroaki Kitano (SAINT, 2012)

A task parallel algorithm for finding all-pairs shortest paths using the GPU. - Tomohiro Okuyama; Fumihiko Ino; Kenichi Hagihara (Int. J. High Perform. Comput. Netw., 2012)

A versatile platform for multilevel modeling of physiological systems: Template/instance framework for large-scale modeling and simulation. - Yoshiyuki Asai; Takeshi Abe; Hideki Oka; Masao Okita; Tomohiro Okuyama; Kenichi Hagihara; Samik Ghosh; Yukiko Matsuoka; Yoshihisa Kurachi; Hiroaki Kitano (EMBC, 2013)

A parallel scheme for accelerating parameter sweep applications on a GPU. - Fumihiko Ino; Kentaro Shigeoka; Tomohiro Okuyama; Masaya Motokubota; Kenichi Hagihara (Concurr. Comput. Pract. Exp., 2014)

Accelerating ODE-Based Simulation of General and Heterogeneous Biophysical Models Using a GPU. - Tomohiro Okuyama; Masao Okita; Takeshi Abe; Yoshiyuki Asai; Hiroaki Kitano; Taishin Nomura; Kenichi Hagihara (IEEE Trans. Parallel Distributed Syst., 2014)

Inactivation of Staphylococcus Aureus by Microplasma. - Marius Blajan; Ahmad Guji Yahaya; Jaroslav Kristof; Tomohiro Okuyama; Kazuo Shimizu (IAS, 2021)