The CATH Domain Structure Database and related resources Gene3D and DHS provide comprehensive domain family information for genome analysis. - Frances M. G. Pearl; Annabel E. Todd; Ian Sillitoe; Mark Dibley; Oliver Redfern; Tony E. Lewis; Christopher Bennett; Russell L. Marsden; Alastair Grant; David A. Lee; Adrian Akpor; Michael Maibaum; et al. (Nucleic Acids Res., 2005)

The CATH domain structure database: new protocols and classification levels give a more comprehensive resource for exploring evolution. - Lesley H. Greene; Tony E. Lewis; Sarah Addou; Alison L. Cuff; Timothy Dallman; Mark Dibley; Oliver Redfern; Frances M. G. Pearl; Rekha Nambudiry; Adam James Reid; Ian Sillitoe; Corin Yeats; et al. (Nucleic Acids Res., 2007)

TREAD: a new genetic programming representation aimed at research of long term complexity growth. - Tony E. Lewis; George D. Magoulas (GECCO, 2008)

Strategies to minimise the total run time of cyclic graph based genetic programming with GPUs. - Tony E. Lewis; George D. Magoulas (GECCO, 2009)

The CATH classification revisited - architectures reviewed and new ways to characterize structural divergence in superfamilies. - Alison L. Cuff; Ian Sillitoe; Tony E. Lewis; Oliver Redfern; Richard Garratt; Janet M. Thornton; Christine A. Orengo (Nucleic Acids Res., 2009)

Tweaking a tower of blocks leads to a TMBL: Pursuing long term fitness growth in program evolution. - Tony E. Lewis; George D. Magoulas (IEEE Congress on Evolutionary Computation, 2010)

Identifying similarities in TMBL programs with alignment to quicken their compilation for GPUs: computational intelligence on consumer games and graphics hardware. - Tony E. Lewis; George D. Magoulas (GECCO (Companion), 2011)

TMBL kernels for CUDA GPUs compile faster using PTX: computational intelligence on consumer games and graphics hardware. - Tony E. Lewis; George D. Magoulas (GECCO (Companion), 2011)

Extending CATH: increasing coverage of the protein structure universe and linking structure with function. - Alison L. Cuff; Ian Sillitoe; Tony E. Lewis; Andrew B. Clegg; Robert Rentzsch; Nicholas Furnham; Marialuisa Pellegrini-Calace; David T. Jones; Janet M. Thornton; Christine A. Orengo (Nucleic Acids Res., 2011)

Genome3D: a UK collaborative project to annotate genomic sequences with predicted 3D structures based on SCOP and CATH domains. - Tony E. Lewis; Ian Sillitoe; Antonina Andreeva; Tom L. Blundell; Daniel W. A. Buchan; Cyrus Chothia; Alison L. Cuff; Jose M. Dana; Ioannis Filippis; Julian Gough; Sarah Hunter; David T. Jones; et al. (Nucleic Acids Res., 2013)

New functional families (FunFams) in CATH to improve the mapping of conserved functional sites to 3D structures. - Ian Sillitoe; Alison L. Cuff; Benoit H. Dessailly; Natalie L. Dawson; Nicholas Furnham; David A. Lee; Jonathan G. Lees; Tony E. Lewis; Romain A. Studer; Robert Rentzsch; Corin Yeats; Janet M. Thornton; et al. (Nucleic Acids Res., 2013)

Genome3D: exploiting structure to help users understand their sequences. - Tony E. Lewis; Ian Sillitoe; Antonina Andreeva; Tom L. Blundell; Daniel W. A. Buchan; Cyrus Chothia; Domenico Cozzetto; Jose M. Dana; Ioannis Filippis; Julian Gough; David T. Jones; Lawrence A. Kelley; et al. (Nucleic Acids Res., 2015)

CATH: comprehensive structural and functional annotations for genome sequences. - Ian Sillitoe; Tony E. Lewis; Alison L. Cuff; Sayoni Das; Paul Ashford; Natalie L. Dawson; Nicholas Furnham; Roman A. Laskowski; David A. Lee; Jonathan G. Lees; Sonja Lehtinen; Romain A. Studer; et al. (Nucleic Acids Res., 2015)

CATH: an expanded resource to predict protein function through structure and sequence. - Natalie L. Dawson; Tony E. Lewis; Sayoni Das; Jonathan G. Lees; David A. Lee; Paul Ashford; Christine A. Orengo; Ian Sillitoe (Nucleic Acids Res., 2017)

Gene3D: Extensive prediction of globular domains in proteins. - Tony E. Lewis; Ian Sillitoe; Natalie L. Dawson; Su Datt Lam; Tristan Clarke; David A. Lee; Christine A. Orengo; Jonathan G. Lees (Nucleic Acids Res., 2018)

cath-resolve-hits: a new tool that resolves domain matches suspiciously quickly. - Tony E. Lewis; Ian Sillitoe; Jonathan G. Lees (Bioinform., 2019)

CATH: expanding the horizons of structure-based functional annotations for genome sequences. - Ian Sillitoe; Natalie L. Dawson; Tony E. Lewis; Sayoni Das; Jonathan G. Lees; Paul Ashford; Adeyelu Tolulope; Harry M. Scholes; Ilya Senatorov; Andra Bujan; Fatima Ceballos Rodriguez-Conde; Benjamin Dowling; et al. (Nucleic Acids Res., 2019)