A minimal mathematical model of nonphotochemical quenching of chlorophyll fluorescence. - Oliver Ebenhöh; Torsten Houwaart; Heiko Lokstein; Stephanie Schlede; Katrin Tirok (Biosyst., 2011)

antaRNA - Multi-objective inverse folding of pseudoknot RNA using ant-colony optimization. - Robert Kleinkauf; Torsten Houwaart; Rolf Backofen; Martin Mann (BMC Bioinform., 2015)

The RNA workbench: best practices for RNA and high-throughput sequencing bioinformatics in Galaxy. - Björn A. Grüning; Jörg Fallmann; Dilmurat Yusuf; Sebastian Will; Anika Erxleben; Florian Eggenhofer; Torsten Houwaart; Bérénice Batut; Pavankumar Videm; Andrea Bagnacani; Markus Wolfien; Steffen Lott; et al. (Nucleic Acids Res., 2017)

Jupyter and Galaxy: Easing entry barriers into complex data analyses for biomedical researchers. - Björn A. Grüning; Eric Rasche; Boris Rebolledo-Jaramillo; Carl Eberhard; Torsten Houwaart; John Chilton; Nate Coraor; Rolf Backofen; James Taylor 001; Anton Nekrutenko (PLoS Comput. Biol., 2017)