Extraction of Substructures of Proteins Essential to their Biological Functions by a Data Mining Technique. - Kenji Satou; Toshihide Ono; Yoshihisa Yamamura; Emiko Furuichi; Satoru Kuhara; Toshihisa Takagi (ISMB, 1997)

Automated extraction of information on protein-protein interactions from the biological literature. - Toshihide Ono; Haretsugu Hishigaki; Akira Tanigami; Toshihisa Takagi (Bioinform., 2001)

Prediction of GPCR-G Protein Coupling Specificity Using Features of Sequences and Biological Functions. - Toshihide Ono; Haretsugu Hishigaki (Genom. Proteom. Bioinform., 2006)

A novel method for gathering and prioritizing disease candidate genes based on construction of a set of disease-related MeSH(R) terms. - Toshihide Ono; Satoru Kuhara (BMC Bioinform., 2014)