Identifying High-Level Components in Combinational Circuits. - Travis E. Doom; Jennifer L. White; Anthony S. Wojcik; Gregory H. Chisholm (Great Lakes Symposium on VLSI, 1998)

Design Recovery for Incomplete Combinational Logic. - Travis E. Doom; Anthony S. Wojcik; Moon-Jung Chung (Great Lakes Symposium on VLSI, 1999)

Candidate subcircuits for functional module identification in logic circuits. - Jennifer L. White; Anthony S. Wojcik; Moon-Jung Chung; Travis E. Doom (ACM Great Lakes Symposium on VLSI, 2000)

PocketMol: A Molecular Visualization Tool for the PocketPC (short paper). - Jason R. Gilder; Michael L. Raymer; Travis E. Doom (BIBE, 2001)

Profile Combinatorics for Fragment Selection in Comparative Protein Structure Modeling. - Deacon J. Sweeney; Gerald M. Alter; Michael L. Raymer; Travis E. Doom (BIBE, 2001)

Efficient Algorithms for Subcircuit Enumeration and Classification for the Module Identification Problem. - Jennifer L. White; Moon-Jung Chung; Anthony S. Wojcik; Travis E. Doom (ICCD, 2001)

A proposed undergraduate bioinformatics curriculum for computer scientists. - Travis E. Doom; Michael L. Raymer; Dan E. Krane; Oscar Garcia (SIGCSE, 2002)

Identifying the Patterns in DNA. - Jason R. Gilder; Dan E. Krane; Travis E. Doom; Michael L. Raymer (MAICS, 2003)

A versatile tool for student projects: an ASM programming language for the Lego mindstorm. - Jason R. Gilder; Michael R. Peterson; Jason Wright; Travis E. Doom (ACM J. Educ. Resour. Comput., 2003)

Crossing the interdisciplinary barrier: a baccalaureate computer science option in bioinformatics. - Travis E. Doom; Michael L. Raymer; Dan E. Krane; Oscar Garcia (IEEE Trans. Educ., 2003)

Knowledge discovery in medical and biological datasets using a hybrid Bayes classifier/evolutionary algorithm. - Michael L. Raymer; Travis E. Doom; Leslie A. Kuhn; William F. Punch III (IEEE Trans. Syst. Man Cybern. Part B, 2003)

Indexing Genomic Databases. - Gina Cooper; Michael L. Raymer; Travis E. Doom; Dan E. Krane; Natsuhiko Futamura (BIBE, 2004)

GA-Facilitated Knowledge Discovery and Pattern Recognition Optimization Applied to the Biochemistry of Protein Solvation. - Michael R. Peterson; Travis E. Doom; Michael L. Raymer (GECCO (1), 2004)

Bioinformatics in the undergraduate curriculum: opportunities for computer science educators. - Debra T. Burhans; Matt DeJongh; Travis E. Doom; Mark D. LeBlanc (SIGCSE, 2004)

Stochastic Model of Protease-Ligand Reactions. - Paul E. Anderson 001; Douglas W. Raiford; Deacon J. Sweeney; Travis E. Doom; Michael L. Raymer (BIBE, 2005)

GA-facilitated KNN classifier optimization with varying similarity measures. - Michael R. Peterson; Travis E. Doom; Michael L. Raymer (Congress on Evolutionary Computation, 2005)

GA-facilitated classifier optimization with varying similarity measures. - Michael R. Peterson; Travis E. Doom; Michael L. Raymer (GECCO, 2005)

Isolation and Visualization of Codon Usage Biases. - Douglas W. Raiford; Dan E. Krane; Travis E. Doom; Michael L. Raymer (BIBE, 2006)

Parsimony approach to test the Evolving Master Gene hypothesis for human Alu repeats. - Sridhar Ramachandran; Travis E. Doom; Michael L. Raymer; Dan E. Krane (BIBE, 2006)

A Proposed Statistical Protocol for the Analysis of Metabolic Toxicological Data Derived from NMR Spectroscopy. - Benjamin J. Kelly; Paul E. Anderson 001; Nicholas V. Reo; Nicholas J. DelRaso; Travis E. Doom; Michael L. Raymer (BIBE, 2007)

A Multi-Objective Genetic Algorithm that Employs a Hybrid Approach for Isolating Codon Usage Bias Indicative of Translational Efficiency. - Douglas W. Raiford; Dan E. Krane; Travis E. Doom; Michael L. Raymer (BIBE, 2007)

Validation of the Human Alu phylogeny: a whole-genome analysis. - Sridhar Ramachandran; Travis E. Doom (BIOCOMP, 2008)

Characterization of 1H NMR spectroscopic data and the generation of synthetic validation sets. - Paul E. Anderson 001; Michael L. Raymer; Benjamin J. Kelly; Nicholas V. Reo; Nicholas J. DelRaso; Travis E. Doom (Bioinform., 2009)

Automated Isolation of Translational Efficiency Bias That Resists the Confounding Effect of GC(AT)-Content. - Douglas W. Raiford; Dan E. Krane; Travis E. Doom; Michael L. Raymer (IEEE ACM Trans. Comput. Biol. Bioinform., 2010)

A Genetic Optimization Approach for Isolating Translational Efficiency Bias. - Douglas W. Raiford; Dan E. Krane; Travis E. Doom; Michael L. Raymer (IEEE ACM Trans. Comput. Biol. Bioinform., 2011)

Inferring the Number of Contributors to Mixed DNA Profiles. - David R. Paoletti; Dan E. Krane; Travis E. Doom; Michael L. Raymer (IEEE ACM Trans. Comput. Biol. Bioinform., 2012)

Panel: Teaching To Increase Diversity and Equity in STEM. - Helen H. Hu; Douglas Blank; Albert Chan; Travis E. Doom (SIGCSE, 2017)

Infrastructure for Continuous Assessment of Retained Relevant Knowledge. - Kathleen Timmerman; Travis E. Doom (Inroads, 2017)