Ancestral Genomes: a resource for reconstructed ancestral genes and genomes across the tree of life. - Xiaosong Huang; Laurent-Philippe Albou; Tremayne Mushayahama; Anushya Muruganujan; Haiming Tang; Paul D. Thomas (Nucleic Acids Res., 2019)

Alliance of Genome Resources Portal: unified model organism research platform. - Julie Agapite; Laurent-Philippe Albou; Suzi A. Aleksander; Joanna Argasinska; Valerio Arnaboldi; Helen Attrill; Susan M. Bello; Judith A. Blake; Olin Blodgett; Yvonne M. Bradford; Carol J. Bult; Scott Cain; et al. (Nucleic Acids Res., 2020)

The Gene Ontology resource: enriching a GOld mine. - Seth Carbon; Eric Douglass; Benjamin M. Good; Deepak R. Unni; Nomi L. Harris; Christopher J. Mungall; Siddartha Basu; Rex L. Chisholm; Robert J. Dodson; Eric Hartline; Petra Fey; Paul D. Thomas; et al. (Nucleic Acids Res., 2021)

PANTHER version 16: a revised family classification, tree-based classification tool, enhancer regions and extensive API. - Huaiyu Mi; Dustin Ebert; Anushya Muruganujan; Caitlin Mills 002; Laurent-Philippe Albou; Tremayne Mushayahama; Paul D. Thomas (Nucleic Acids Res., 2021)

Annotation Query (AnnoQ): an integrated and interactive platform for large-scale genetic variant annotation. - Zhu Liu; Tremayne Mushayahama; Bryan Queme; Dustin Ebert; Anushya Muruganujan; Caitlin Mills 002; Paul D. Thomas; Huaiyu Mi (Nucleic Acids Res., 2022)