CRF-based models of protein surfaces improve protein-protein interaction site predictions. - Zhijie Dong; Keyu Wang; Truong Khanh Linh Dang; Mehmet Gültas; Marlon Welter; Torsten Wierschin; Mario Stanke; Stephan Waack (BMC Bioinform., 2014)

A Novel Sequence-Based Feature for the Identification of DNA-Binding Sites in Proteins Using Jensen-Shannon Divergence. - Truong Khanh Linh Dang; Cornelia Meckbach; Rebecca Tacke; Stephan Waack; Mehmet Gültas (Entropy, 2016)

A graph-based algorithm for detecting rigid domains in protein structures. - Truong Khanh Linh Dang; Thach Nguyen; Michael Habeck; Mehmet Gültas; Stephan Waack (BMC Bioinform., 2021)