In vivo tracing of major rat brain pathways using manganese-enhanced magnetic resonance imaging and three-dimensional digital atlasing. - Trygve B. Leergaard; Jan G. Bjaalie; Anna Devor; Lawrence L. Wald; Anders M. Dale (NeuroImage, 2003)

Expression mapping of tetracycline-responsive prion protein promoter: Digital atlasing for generating cell-specific disease models. - Jana Boy; Trygve B. Leergaard; Thorsten Schmidt; Francis Odeh; Ulrike Bichelmeier; Silke Nuber; Carsten Holzmann; Andreas Wree; Stanley B. Prusiner; Hermann Bujard; Olaf Riess; Jan G. Bjaalie (NeuroImage, 2006)

Three-dimensional atlas system for mouse and rat brain imaging data. - Trine Hjornevik; Trygve B. Leergaard; Dmitri Darine; Olve Moldestad; Anders M. Dale; Frode Willoch; Jan G. Bjaalie (Frontiers Neuroinformatics, 2007)

Where in the brain are the genes expressed. - Trygve B. Leergaard; Ilya Zaslavsky (Frontiers Neuroinformatics, 2007)

Toward a workbench for rodent brain image data systems architecture and design. - Ivar A. Moene; Shankar Subramaniam; Dmitri Darine; Trygve B. Leergaard; Jan G. Bjaalie (Neuroinformatics, 2007)

Digital Atlas of Anatomical Subdivisions and Boundaries of the Rat Hippocampal Region. - Lisa J. Kjonigsen; Trygve B. Leergaard; Menno Witter; Jan G. Bjaalie (Frontiers Neuroinformatics, 2011)

Atlas of transgenic Tet-Off Ca2+/calmodulin-dependent protein kinase II and prion protein promoter activity in the mouse brain. - Francis Odeh; Trygve B. Leergaard; Jana Boy; Thorsten Schmidt; Olaf Riess; Jan G. Bjaalie (NeuroImage, 2011)

Population-averaged diffusion tensor imaging atlas of the Sprague Dawley rat brain. - Jelle Veraart; Trygve B. Leergaard; Bjørnar T. Antonsen; Wim Van Hecke; Ines Blockx; Ben Jeurissen; Yi Jiang; Annemie van der Linden; G. Allan Johnson; Marleen Verhoye; Jan Sijbers (NeuroImage, 2011)

Mapping the Connectome: Multi-Level Analysis of Brain Connectivity. - Trygve B. Leergaard; Claus C. Hilgetag; Olaf Sporns (Frontiers Neuroinformatics, 2012)

Identification and characterization of Huntington related pathology: An in vivo DKI imaging study. - Ines Blockx; Marleen Verhoye; Johan Van Audekerke; Irene Bergwerf; Jack X. Kane; Rafael Delgado y Palacios; Jelle Veraart; Ben Jeurissen; Kerstin Raber; Stephan Von Hörsten; Peter Ponsaerts; Jan Sijbers; et al. (NeuroImage, 2012)

Brain-wide map of efferent projections from rat barrel cortex. - Izabela M. Zakiewicz; Jan G. Bjaalie; Trygve B. Leergaard (Frontiers Neuroinformatics, 2014)

Waxholm Space atlas of the Sprague Dawley rat brain. - Eszter A. Papp; Trygve B. Leergaard; Evan Calabrese; G. Allan Johnson; Jan G. Bjaalie (NeuroImage, 2014)

Waxholm Space atlas of the rat brain hippocampal region: Three-dimensional delineations based on magnetic resonance and diffusion tensor imaging. - Lisa J. Kjonigsen; Sveinung Lillehaug; Jan G. Bjaalie; Menno P. Witter; Trygve B. Leergaard (NeuroImage, 2015)

Addendum to "Waxholm Space atlas of the Sprague Dawley rat brain" [NeuroImage 97 (2014) 374-386]. - Eszter A. Papp; Trygve B. Leergaard; Evan Calabrese; G. Allan Johnson; Jan G. Bjaalie (NeuroImage, 2015)

Brain-Wide Mapping of Axonal Connections: Workflow for Automated Detection and Spatial Analysis of Labeling in Microscopic Sections. - Eszter A. Papp; Trygve B. Leergaard; Gergely Csúcs; Jan G. Bjaalie (Frontiers Neuroinformatics, 2016)

QUINT: Workflow for Quantification and Spatial Analysis of Features in Histological Images From Rodent Brain. - Sharon C. Yates; Nicolaas E. Groeneboom; Christopher Coello; Stefan F. Lichtenthaler; Peer-Hendrik Kuhn; Hans-Ulrich Demuth; Maike Hartlage-Rübsamen; Steffen Roßner; Trygve B. Leergaard; Anna Kreshuk; Maja A. Puchades; Jan G. Bjaalie (Frontiers Neuroinformatics, 2019)

Waxholm Space atlas of the rat brain auditory system: Three-dimensional delineations based on structural and diffusion tensor magnetic resonance imaging. - Kirsten K. Osen; Jala Imad; Arvind E. Wennberg; Eszter A. Papp; Trygve B. Leergaard (NeuroImage, 2019)

A Standards Organization for Open and FAIR Neuroscience: the International Neuroinformatics Coordinating Facility. - Mathew Birdsall Abrams; Jan G. Bjaalie; Samir Das; Gary F. Egan; Satrajit S. Ghosh; Wojtek James Goscinski; Jeffrey S. Grethe; Jeanette Hellgren Kotaleski; Eric Tatt Wei Ho; David N. Kennedy; Linda J. Lanyon; Trygve B. Leergaard; et al. (Neuroinformatics, 2022)

Correction to: A Standards Organization for Open and FAIR Neuroscience: the International Neuroinformatics Coordinating Facility. - Mathew Birdsall Abrams; Jan G. Bjaalie; Samir Das; Gary F. Egan; Satrajit S. Ghosh; Wojtek James Goscinski; Jeffrey S. Grethe; Jeanette Hellgren Kotaleski; Eric Tatt Wei Ho; David N. Kennedy; Linda J. Lanyon; Trygve B. Leergaard; et al. (Neuroinformatics, 2022)

A neuroscientist's guide to using murine brain atlases for efficient analysis and transparent reporting. - Heidi Kleven; Ingrid Reiten; Camilla H. Blixhavn; Ulrike Schlegel; Martin Øvsthus; Eszter A. Papp; Maja A. Puchades; Jan G. Bjaalie; Trygve B. Leergaard; Ingvild Elise Bjerke (Frontiers Neuroinformatics, 2023)

The Locare workflow: representing neuroscience data locations as geometric objects in 3D brain atlases. - Camilla H. Blixhavn; Ingrid Reiten; Heidi Kleven; Martin Øvsthus; Sharon C. Yates; Ulrike Schlegel; Maja A. Puchades; Oliver Schmid; Jan G. Bjaalie; Ingvild Elise Bjerke; Trygve B. Leergaard (Frontiers Neuroinformatics, 2024)