Genome annotation in the presence of insertional RNA editing. - Christina Beargie; Tsunglin Liu; Mark Corriveau; Ha Youn Lee; Jonatha Gott; Ralf Bundschuh (Bioinform., 2008)

GR-Aligner: an algorithm for aligning pairwise genomic sequences containing rearrangement events. - Te-Chin Chu; Tsunglin Liu; D. T. Lee; Greg C. Lee; Arthur Chun-Chieh Shih (Bioinform., 2009)

OMACC: an Optical-Map-Assisted Contig Connector for improving de novo genome assembly. - Yi-Min Chen; Chun-Hui Yu; Chi-Chuan Hwang; Tsunglin Liu (BMC Syst. Biol., 2013)

Light-RCV: a lightweight read coverage viewer for next generation sequencing data. - Che-Wei Chang; Wen-Bin Lee; An Chen-Deng; Tsunglin Liu; Joseph T. Tseng; Darby Tien-Hao Chang (BMC Bioinform., 2015)

Obtaining long 16S rDNA sequences using multiple primers and its application on dioxin-containing samples. - Yi-Lin Chen; Chuan-Chun Lee; Ya-Lan Lin; Kai-Min Yin; Chung-Liang Ho; Tsunglin Liu (BMC Bioinform., 2015)

TRIg: a robust alignment pipeline for non-regular T-cell receptor and immunoglobulin sequences. - Sheng-Jou Hung; Yi-Lin Chen; Chia-Hung Chu; Chuan-Chun Lee; Wan-Li Chen; Ya-Lan Lin; Ming-Ching Lin; Chung-Liang Ho; Tsunglin Liu (BMC Bioinform., 2016)

Joining Illumina paired-end reads for classifying phylogenetic marker sequences. - Tsunglin Liu; Chen-Yu Chen; An Chen-Deng; Yi-Lin Chen; Jiu-Yao Wang; Yung-I Hou; Min-Ching Lin (BMC Bioinform., 2020)