SALT: Semantically Annotated LATEX. - Tudor Groza; Haklae Kim; Siegfried Handschuh (SAAW@ISWC, 2006)

The salt triple: framework editor publisher. - Tudor Groza; Alexander Schutz; Siegfried Handschuh (ACM Symposium on Document Engineering, 2007)

SALT: a semantic approach for generating document representations. - Tudor Groza; Alexander Schutz; Siegfried Handschuh (ACM Symposium on Document Engineering, 2007)

SALT - Semantically Annotated LaTeX for Scientific Publications. - Tudor Groza; Siegfried Handschuh; Knud Möller; Stefan Decker (ESWC, 2007)

SALT: Weaving the Claim Web. - Tudor Groza; Knud Möller; Siegfried Handschuh; Diana Trif; Stefan Decker (ISWC/ASWC, 2007)

KonneXSALT: First Steps Towards a Semantic Claim Federation Infrastructure. - Tudor Groza; Siegfried Handschuh; Knud Möller; Stefan Decker (ESWC, 2008)

Expressing Argumentative Discussions in Social Media Sites. - Christoph Lange 002; Uldis Bojars; Tudor Groza; John G. Breslin; Siegfried Handschuh (SDoW@ISWC, 2008)

Adding Provenance and Evolution Information to Modularized Argumentation Models. - Tudor Groza; Siegfried Handschuh; John G. Breslin (Web Intelligence, 2008)

CORAAL - Towards Deep Exploitation of Textual Resources in Life Sciences. - Vít Novácek; Tudor Groza; Siegfried Handschuh (AIME, 2009)

Knowledge-based search for oncological literature. - Vít Novácek; Tudor Groza; Siegfried Handschuh (CBMS, 2009)

A Hybrid Approach Towards Information Expansion based on Shallow and Deep Metadata. - Tudor Groza; Siegfried Handschuh (KEOD, 2009)

Bridging the Gap between Linked Data and the Semantic Desktop. - Tudor Groza; Laura Dragan; Siegfried Handschuh; Stefan Decker (ISWC, 2009)

An Abstract Framework for Modeling Argumentation in Virtual Communities. - Tudor Groza; Siegfried Handschuh; John G. Breslin; Stefan Decker (Int. J. Virtual Communities Soc. Netw., 2009)

From Personal Notes to Linked Social Media. - Laura Dragan; Alexandre Passant; Tudor Groza; Siegfried Handschuh (AAAI Spring Symposium: Linked Data Meets Artificial Intelligence, 2010)

Towards Consolidated Presence. - Manfred Hauswirth; Jérôme Euzenat; Owen Friel; Keith Griffin; P. Hession; Brendan Jennings; Tudor Groza; Siegfried Handschuh; Ivana Podnar Zarko; Axel Polleres; Antoine Zimmermann (CollaborateCom, 2010)

Argumentation 3.0: how Semantic Web technologies can improve argumentation modeling in Web 2.0 environments. - Jodi Schneider; Alexandre Passant; Tudor Groza; John G. Breslin (COMMA, 2010)

Publishing Semantic Personal Notes as Linked Data. - Laura Dragan; Alexandre Passant; Tudor Groza; Siegfried Handschuh (EKAW (Posters and Demos), 2010)

Towards automatic extraction of epistemic items from scientific publications. - Tudor Groza; Siegfried Handschuh; Georgeta Bordea (SAC, 2010)

CORAAL - Dive into publications, bathe in the knowledge. - Vít Novácek; Tudor Groza; Siegfried Handschuh; Stefan Decker (J. Web Semant., 2010)

Towards Knowledge-Based Life Science Publication Repositories. - Vít Novácek; Tudor Groza; Siegfried Handschuh (Semantic e-Science, 2010)

The NEPOMUK Semantic Desktop. - Ansgar Bernardi; Gunnar Aastrand Grimnes; Tudor Groza; Simon Scerri (Context and Semantics for Knowledge Management, 2011)

Interacting with Linked Data via Semantically Annotated Widgets. - Armin Haller; Tudor Groza; Florian Rosenberg (JIST, 2011)

High Speed Capture, Retrieval and Rendering of Segment-Based Annotations on 3D Museum Objects. - Chih-Hao Yu; Tudor Groza; Jane Hunter 001 (ICADL, 2011)

Linking Semantic Desktop Data to the Web of Data. - Laura Dragan; Renaud Delbru; Tudor Groza; Siegfried Handschuh; Stefan Decker (ISWC (2), 2011)

Using Semantic Web Technologies to Build a Community-Driven Knowledge Curation Platform for the Skeletal Dysplasia Domain. - Tudor Groza; Andreas Zankl; Yuan-Fang Li; Jane Hunter 001 (ISWC (2), 2011)

A Novel Approach for Interacting with Linked Open Data. - Armin Haller; Tudor Groza (WISE, 2011)

Capturing Rhetoric and Argumentation Aspects within Scientific Publications. - Tudor Groza; Siegfried Handschuh; Stefan Decker (J. Data Semant., 2011)

Experiences with Modeling Composite Phenotypes in the SKELETOME Project. - Tudor Groza; Andreas Zankl; Jane Hunter 001 (ISWC (2), 2012)

Semantic Similarity-Driven Decision Support in the Skeletal Dysplasia Domain. - Razan Paul; Tudor Groza; Andreas Zankl; Jane Hunter 001 (ISWC (2), 2012)

The Bone Dysplasia Ontology: integrating genotype and phenotype information in the skeletal dysplasia domain. - Tudor Groza; Jane Hunter 001; Andreas Zankl (BMC Bioinform., 2012)

Supervised segmentation of phenotype descriptions for the human skeletal phenome using hybrid methods. - Tudor Groza; Jane Hunter 001; Andreas Zankl (BMC Bioinform., 2012)

Advances in Semantic Authoring and Publishing - Tudor Groza (IOS Press, 2012)

Using silver and semi-gold standard corpora to compare open named entity recognisers. - Tudor Groza; Anika Oellrich; Nigel Collier (BIBM, 2013)

Reasoning on Crowd-Sourced Semantic Annotations to Facilitate Cataloguing of 3D Artefacts in the Cultural Heritage Domain. - Chih-Hao Yu; Tudor Groza; Jane Hunter 001 (ISWC (2), 2013)

Semantic and Time-Dependent Expertise Profiling Models in Community-Driven Knowledge Curation Platforms. - Hasti Ziaimatin; Tudor Groza; Jane Hunter 001 (Future Internet, 2013)

State of the art and open challenges in community-driven knowledge curation. - Tudor Groza; Tania Tudorache; Michel Dumontier (J. Biomed. Informatics, 2013)

From raw publications to Linked Data. - Tudor Groza; Gunnar Aastrand Grimnes; Siegfried Handschuh; Stefan Decker (Knowl. Inf. Syst., 2013)

A review of argumentation for the Social Semantic Web. - Jodi Schneider; Tudor Groza; Alexandre Passant (Semantic Web, 2013)

Automated Generation of Test Suites for Error Analysis of Concept Recognition Systems. - Tudor Groza; Karin Verspoor (ALTA, 2014)

Load Balancing for Imbalanced Data Sets: Classifying Scientific Artefacts for Evidence Based Medicine. - Hamed Hassanzadeh; Tudor Groza; Anthony N. Nguyen; Jane Hunter 001 (PRICAI, 2014)

Semantic interestingness measures for discovering association rules in the skeletal dysplasia domain. - Razan Paul; Tudor Groza; Jane Hunter 001; Andreas Zankl (J. Biomed. Semant., 2014)

Identifying scientific artefacts in biomedical literature: The Evidence Based Medicine use case. - Hamed Hassanzadeh; Tudor Groza; Jane Hunter 001 (J. Biomed. Informatics, 2014)

Inferring characteristic phenotypes via class association rule mining in the bone dysplasia domain. - Razan Paul; Tudor Groza; Jane Hunter 001; Andreas Zankl (J. Biomed. Informatics, 2014)

Similarity Metrics for Clustering PubMed Abstracts for Evidence Based Medicine. - Anthony N. Nguyen; Jane Hunter 001; Hamed Hassanzadeh; Diego Mollá; Tudor Groza (ALTA, 2015)

UQeResearch: Semantic Textual Similarity Quantification. - Hamed Hassanzadeh; Tudor Groza; Anthony N. Nguyen; Jane Hunter 001 (SemEval@NAACL-HLT, 2015)

PhenoMiner: from text to a database of phenotypes associated with OMIM diseases. - Nigel Collier; Tudor Groza; Damian Smedley; Peter N. Robinson; Anika Oellrich; Dietrich Rebholz-Schuhmann (Database J. Biol. Databases Curation, 2015)

Automatic concept recognition using the Human Phenotype Ontology reference and test suite corpora. - Tudor Groza; Sebastian Köhler 001; Sandra C. Doelken; Nigel Collier; Anika Oellrich; Damian Smedley; Francisco M. Couto; Gareth Baynam; Andreas Zankl; Peter N. Robinson (Database J. Biol. Databases Curation, 2015)

Concept selection for phenotypes and diseases using learn to rank. - Nigel Collier; Anika Oellrich; Tudor Groza (J. Biomed. Semant., 2015)

Capturing domain knowledge from multiple sources: the rare bone disorders use case. - Tudor Groza; Tania Tudorache; Peter N. Robinson; Andreas Zankl (J. Biomed. Semant., 2015)

Special issue on bio-ontologies and phenotypes. - Larisa N. Soldatova; Nigel Collier; Anika Oellrich; Tudor Groza; Karin Verspoor; Philippe Rocca-Serra; Michel Dumontier; Nigam H. Shah (J. Biomed. Semant., 2015)

Extracting structured data from publications in the Art Conservation Domain. - Suleiman Odat; Tudor Groza; Jane Hunter 001 (Digit. Scholarsh. Humanit., 2015)

Building a dictionary of lexical variants for phenotype descriptors. - Simon Kocbek; Tudor Groza (BioNLP@ACL, 2016)

The digital revolution in phenotyping. - Anika Oellrich; Nigel Collier; Tudor Groza; Dietrich Rebholz-Schuhmann; Nigam Shah; Olivier Bodenreider; Mary Regina Boland; Ivo I. Georgiev; Hongfang Liu; Kevin M. Livingston; Augustin Luna; Ann-Marie Mallon; et al. (Briefings Bioinform., 2016)

Thematic issue of the Second combined Bio-ontologies and Phenotypes Workshop. - Karin Verspoor; Anika Oellrich; Nigel Collier; Tudor Groza; Philippe Rocca-Serra; Larisa N. Soldatova; Michel Dumontier; Nigam Shah (J. Biomed. Semant., 2016)

Modelling expertise at different levels of granularity using semantic similarity measures in the context of collaborative knowledge-curation platforms. - Hasti Ziaimatin; Tudor Groza; Tania Tudorache; Jane Hunter 001 (J. Intell. Inf. Syst., 2016)

Extracting Disease-Phenotype Relations from Text with Disease-Phenotype Concept Recognisers and Association Rule Mining. - Simon Kocbek; Tudor Groza (CBMS, 2017)

The Human Phenotype Ontology in 2017. - Sebastian Köhler 001; Nicole A. Vasilevsky; Mark Engelstad; Erin Foster; Julie A. McMurry; Ségolène Aymé; Gareth Baynam; Susan M. Bello; Cornelius F. Boerkoel; Kym M. Boycott; Michael Brudno; Orion J. Buske; et al. (Nucleic Acids Res., 2017)

The Monarch Initiative: an integrative data and analytic platform connecting phenotypes to genotypes across species. - Christopher J. Mungall; Julie A. McMurry; Sebastian Köhler 001; James P. Balhoff; Charles D. Borromeo; Matthew H. Brush; Seth Carbon; Tom Conlin; Nathan A. Dunn; Mark Engelstad; Erin Foster; Jean-Philippe F. Gourdine; et al. (Nucleic Acids Res., 2017)

CogStack - experiences of deploying integrated information retrieval and extraction services in a large National Health Service Foundation Trust hospital. - Richard G. Jackson; Ismail Emre Kartoglu; Clive Stringer; Genevieve Gorrell; Angus Roberts; Xingyi Song; Honghan Wu; Asha Agrawal; Kenneth Lui; Tudor Groza; Damian Lewsley; Doug Northwood; et al. (BMC Medical Informatics Decis. Mak., 2018)

Expansion of the Human Phenotype Ontology (HPO) knowledge base and resources. - Sebastian Köhler 001; Leigh Carmody; Nicole A. Vasilevsky; Julius O. B. Jacobsen; Daniel Danis; Jean-Philippe F. Gourdine; Michael A. Gargano; Nomi L. Harris; Nicolas Matentzoglu; Julie A. McMurry; David Osumi-Sutherland; Valentina Cipriani; et al. (Nucleic Acids Res., 2019)

BioHackathon 2015: Semantics of data for life sciences and reproducible research. - Rutger A. Vos; Toshiaki Katayama; Hiroyuki Mishima; Shin Kawano; Shuichi Kawashima; Jin-Dong Kim; Yuki Moriya; Toshiaki Tokimatsu; Atsuko Yamaguchi; Yasunori Yamamoto; Hongyan Wu; Peter Amstutz; et al. (F1000Research, 2020)

The Monarch Initiative in 2019: an integrative data and analytic platform connecting phenotypes to genotypes across species. - Kent A. Shefchek; Nomi L. Harris; Michael A. Gargano; Nicolas Matentzoglu; Deepak R. Unni; Matthew H. Brush; Dan Keith; Tom Conlin; Nicole A. Vasilevsky; Xingmin Aaron Zhang; James P. Balhoff; Larry Babb; et al. (Nucleic Acids Res., 2020)

The International Mouse Phenotyping Consortium: comprehensive knockout phenotyping underpinning the study of human disease. - Tudor Groza; Federico López-Gómez; Hamed Haseli Mashhadi; Violeta Muñoz-Fuentes; Osman Nuri Günes; Robert J. Wilson; Pilar Cacheiro; Anthony Frost; Piia Keskivali-Bond; Bora Vardal; Aaron McCoy; Tsz Kwan Cheng; et al. (Nucleic Acids Res., 2023)

PDCM Finder: an open global research platform for patient-derived cancer models. - Zinaida Perova; Mauricio Martínez; Tushar Mandloi; Federico López-Gómez; Csaba Halmagyi; Alex Follette; Jeremy C. Mason; Steven Newhauser; Dale A. Begley; Debra M. Krupke; Carol J. Bult; Helen E. Parkinson; et al. (Nucleic Acids Res., 2023)

The NHGRI-EBI GWAS Catalog: knowledgebase and deposition resource. - Elliot Sollis; Abayomi Mosaku; Ala Abid; Annalisa Buniello; Maria Cerezo; Laurent Gil; Tudor Groza; Osman Nuri Günes; Peggy Hall; James D. Hayhurst; Arwa Ibrahim; Yue Ji; et al. (Nucleic Acids Res., 2023)

Term-BLAST-like alignment tool for concept recognition in noisy clinical texts. - Tudor Groza; Honghan Wu; Marcel E. Dinger; Daniel Danis; Coleman Hilton; Anita Bagley; Jon R. Davids; Ling Luo 001; Zhiyong Lu; Peter N. Robinson (Bioinform., 2023)

REAL: A Retrieval-Augmented Entity Linking Approach for Biomedical Concept Recognition. - Darya Shlyk; Tudor Groza; Marco Mesiti; Stefano Montanelli; Emanuele Cavalleri (BioNLP@ACL, 2024)

An evaluation of GPT models for phenotype concept recognition. - Tudor Groza; J. Harry Caufield; Dylan Gration; Gareth Baynam; Melissa A. Haendel; Peter N. Robinson; Christopher J. Mungall; Justin T. Reese (BMC Medical Informatics Decis. Mak., 2024)