Modeling of Neuronal Growth In Vitro: Comparison of Simulation Tools NETMORPH and CX3D. - Jugoslava Acimovic; Tuomo Mäki-Marttunen; Riikka Havela; Heidi Teppola; Marja-Leena Linne (EURASIP J. Bioinform. Syst. Biol., 2011)

Information Diversity in Structure and Dynamics of Simulated Neuronal Networks. - Tuomo Mäki-Marttunen; Jugoslava Acimovic; Matti Nykter; Juha Kesseli; Keijo Ruohonen; Olli Yli-Harja; Marja-Leena Linne (Frontiers Comput. Neurosci., 2011)

Effect of Ionic Diffusion on Extracellular Potentials in Neural Tissue. - Geir Halnes; Tuomo Mäki-Marttunen; Daniel X. Keller; Klas H. Pettersen; Ole A. Andreassen; Gaute T. Einevoll (PLoS Comput. Biol., 2016)

An Evaluation of the Accuracy of Classical Models for Computing the Membrane Potential and Extracellular Potential for Neurons. - Aslak Tveito; Karoline H. Jæger; Glenn T. Lines; Lukasz Paszkowski; Joakim Sundnes; Andrew G. Edwards; Tuomo Mäki-Marttunen; Geir Halnes; Gaute T. Einevoll (Frontiers Comput. Neurosci., 2017)

An Algorithm for Motif-Based Network Design. - Tuomo Mäki-Marttunen (IEEE ACM Trans. Comput. Biol. Bioinform., 2017)

Computational Modeling of Genetic Contributions to Excitability and Neural Coding in Layer V Pyramidal Cells: Applications to Schizophrenia Pathology. - Tuomo Mäki-Marttunen; Anna Devor; William A. Phillips; Anders M. Dale; Ole A. Andreassen; Gaute T. Einevoll (Frontiers Comput. Neurosci., 2019)

Experience-dependent modulation of the visual evoked potential: Testing effect sizes, retention over time, and associations with age in 415 healthy individuals. - Mathias Valstad; Torgeir Moberget; Daniël Roelfs; Nora B. Slapø; Clara M. F. Timpe; Dani Beck; Geneviève Richard; Linn Sofie Sæther; Beathe Haatveit; Knut Andre Skaug; Jan Egil Nordvik; Christoffer Hatlestad-Hall; et al. (NeuroImage, 2020)

Excitatory and inhibitory effects of HCN channel modulation on excitability of layer V pyramidal cells. - Tuomo Mäki-Marttunen; Verónica Mäki-Marttunen (PLoS Comput. Biol., 2022)