XenoSite server: a web-available site of metabolism prediction tool. - Matthew K. Matlock; Tyler B. Hughes; Sanjay Joshua Swamidass (Bioinform., 2015)

Extending P450 site-of-metabolism models with region-resolution data. - Jed M. Zaretzki; Michael R. Browning; Tyler B. Hughes; S. Joshua Swamidass (Bioinform., 2015)

A simple model predicts UGT-mediated metabolism. - Na Le Dang; Tyler B. Hughes; Varun Krishnamurthy; S. Joshua Swamidass (Bioinform., 2016)

Modeling Small-Molecule Reactivity Identifies Promiscuous Bioactive Compounds. - Matthew K. Matlock; Tyler B. Hughes; Jayme L. Dahlin; S. Joshua Swamidass (J. Chem. Inf. Model., 2018)

The Metabolic Rainbow: Deep Learning Phase I Metabolism in Five Colors. - Na Le Dang; Matthew K. Matlock; Tyler B. Hughes; S. Joshua Swamidass (J. Chem. Inf. Model., 2020)

Metabolic Forest: Predicting the Diverse Structures of Drug Metabolites. - Tyler B. Hughes; Na Le Dang; Ayush Kumar; Noah R. Flynn; S. Joshua Swamidass (J. Chem. Inf. Model., 2020)