Time scale decomposition in complex reaction systems: A graph theoretic analysis. - Udit Gupta 002; Seongmin Heo; Aditya Bhan; Prodromos Daoutidis (Comput. Chem. Eng., 2016)

Reaction Network Viewer (ReNView): An open-source framework for reaction path visualization of chemical reaction systems. - Udit Gupta 002; Dionisios G. Vlachos (SoftwareX, 2020)

Learning Chemistry of Complex Reaction Systems via a Python First-Principles Reaction Rule Stencil (pReSt) Generator. - Udit Gupta 002; Dionisios G. Vlachos (J. Chem. Inf. Model., 2021)