Exploration of homodimer receptor: homodimer protein interactions. - Julio Vera; Taesoo Kwon; Ulf Schmitz; Walter Kolch; Olaf Wolkenhauer (Int. J. Bioinform. Res. Appl., 2009)

Non-coding RNA detection methods combined to improve usability, reproducibility and precision. - Peter Raasch; Ulf Schmitz; Nadja Patenge; Julio Vera; Bernd Kreikemeyer; Olaf Wolkenhauer (BMC Bioinform., 2010)

A model-based strategy to investigate the role of microRNA regulation in cancer signalling networks. - Svetoslav G. Nikolov; Julio Vera; Ulf Schmitz; Olaf Wolkenhauer (Theory Biosci., 2011)

Personalized cancer immunotherapy using Systems Medicine approaches. - Shailendra K. Gupta; Tanushree Jaitly; Ulf Schmitz; Gerold Schuler; Olaf Wolkenhauer; Julio Vera (Briefings Bioinform., 2016)

The RNA world in the 21st century - a systems approach to finding non-coding keys to clinical questions. - Ulf Schmitz; Hojjat Naderi-Meshkin; Shailendra K. Gupta; Olaf Wolkenhauer; Julio Vera (Briefings Bioinform., 2016)

TRAPLINE: a standardized and automated pipeline for RNA sequencing data analysis, evaluation and annotation. - Markus Wolfien; Christian Rimmbach; Ulf Schmitz; Julia Jeannine Jung; Stefan Krebs; Gustav Steinhoff; Robert David; Olaf Wolkenhauer (BMC Bioinform., 2016)

Exosomal lncRNAs and cancer: connecting the missing links. - Hojjat Naderi-Meshkin; Xin Lai 002; Raheleh Amirkhah; Julio Vera; John E. J. Rasko; Ulf Schmitz (Bioinform., 2019)

Prospects and challenges of cancer systems medicine: from genes to disease networks. - Mohammad Reza Karimi; Amir-Hossein Karimi; Shamsozoha Abolmaali; Mehdi Sadeghi; Ulf Schmitz (Briefings Bioinform., 2022)

Recent advances in cancer fusion transcript detection. - Ryley Dorney; Bijay P. Dhungel; John E. J. Rasko; Lionel Hebbard; Ulf Schmitz (Briefings Bioinform., 2023)

SpliceWiz: interactive analysis and visualization of alternative splicing in R. - Alex C. H. Wong; Justin J.-L. Wong; John E. J. Rasko; Ulf Schmitz (Briefings Bioinform., 2024)

TARGET-SL: precision essential gene prediction using driver prioritisation and synthetic lethality. - Rhys Gillman; Matt A. Field; Ulf Schmitz; Lionel Hebbard (Briefings Bioinform., 2025)