Three-dimensional ROIs in Brain PET. - Jouni M. Mykkänen; Martti Juhola; Ulla Ruotsalainen (MIE, 1999)

Extracting VOIs from brain PET images. - Jouni M. Mykkänen; Martti Juhola; Ulla Ruotsalainen (Int. J. Medical Informatics, 2000)

ICA for acoustic echo control. - Margarita Magadán; Riitta Niemistö; Ulla Ruotsalainen; Jyrki Mottonen (EUSIPCO, 2002)

Generalization of Median Root Prior Reconstruction. - Sakari Alenius; Ulla Ruotsalainen (IEEE Trans. Medical Imaging, 2002)

Delineation of drain Structures from Positron Emission Tomography Images with Deformable Models. - Jouni M. Mykkänen; Jussi Tohka; Ulla Ruotsalainen (MIE, 2003)

Neuroscience data and tool sharing - A legal and policy framework for neuroinformatics. - Peter Eckersley; Gary F. Egan; Erik De Schutter; Yiyuan Tang; Mirko Novak; Václav Sebesta; Line Matthiessen; Iiro P. Jääskeläinen; Ulla Ruotsalainen; Andreas V. M. Herz; K. Peter Hoffmann; Raphael Ritz; et al. (Neuroinformatics, 2003)

Assessment of Separation of Functional Components with ICA from Dynamic Cardiac Perfusion PET Phantom Images for Volume Extraction with Deformable Surface Models. - Anu Juslin; Anthonin Reilhac; Margarita Magadán-Méndez; Edisson Albán; Jussi Tohka; Ulla Ruotsalainen (FIMH, 2005)

A Comparative Study of Angular Extrapolation in Sinogram and Stackgram Domains for Limited Angle Tomography. - Antti P. Happonen; Ulla Ruotsalainen (SCIA, 2005)

Automatic extraction of brain surface and mid-sagittal plane from PET images applying deformable models. - Jouni M. Mykkänen; Jussi Tohka; Jouni Luoma; Ulla Ruotsalainen (Comput. Methods Programs Biomed., 2005)

Segmentation of Dynamic Emission Tomography Data in Projection Space. - Evgeny Krestyannikov; Jussi Tohka; Ulla Ruotsalainen (CVAMIA, 2006)

Adaptive edge detection based on 3D kernel functions for biomedical image analysis. - Edisson Albán; Jussi Tohka; Ulla Ruotsalainen (Image Processing: Algorithms and Systems, 2006)

Robust Estimation of Bioaffinity Assay Fluorescence Signals. - Dimitris Glotsos; Jussi Tohka; Jori Soukka; Juhani T. Soini; Ulla Ruotsalainen (IEEE Trans. Inf. Technol. Biomed., 2006)

Automatic method for caveolar structure detection and intensity distribution analysis from microscopy images. - Harri Pölönen; Maurice Jansen; Jussi Tohka; Elina Ikonen; Ulla Ruotsalainen (EUSIPCO, 2007)

Automatic approach for analyzing the endosome movement in fluorescence video microscopy. - Carol Rus; Mikko Vanninen; Ulla Ruotsalainen (EUSIPCO, 2007)

Statistical Modeling of Attenuation-Corrected Pet Data with Application to Reconstruction of Regional Time Activity Curves. - Evgeny Krestyannikov; Jussi Tohka; Ulla Ruotsalainen (ISBI, 2007)

Accurate 3D Left-Right Brain Hemisphere Segmentation in MR Images Based on Shape Bottlenecks and Partial Volume Estimation. - Lu Zhao; Jussi Tohka; Ulla Ruotsalainen (SCIA, 2007)

Shape variability of the human striatum - Effects of age and gender. - Juha Koikkalainen; Jussi Hirvonen; Mikko Nyman; Jyrki Lötjönen; Jarmo Hietala; Ulla Ruotsalainen (NeuroImage, 2007)

Genetic Algorithms for Finite Mixture Model Based Voxel Classification in Neuroimaging. - Jussi Tohka; Evgeny Krestyannikov; Ivo D. Dinov; Allan MacKenzie-Graham; David W. Shattuck; Ulla Ruotsalainen; Arthur W. Toga (IEEE Trans. Medical Imaging, 2007)

Evaluation of Robust Estimators Applied to Fluorescence Assays. - Mikko Tuomas Västilä; Sari Peltonen; Jori Soukka; Edisson Albán; Juhani T. Soini; Ulla Ruotsalainen (EURASIP J. Adv. Signal Process., 2008)

Automatic intensity quantification of fluorescence targets from microscope images with maximum likelihood estimation. - Harri Pölönen; Jussi Tohka; Ulla Ruotsalainen (EUSIPCO, 2009)

Automatic Quantification of Fluorescence from Clustered Targets in Microscope Images. - Harri Pölönen; Jussi Tohka; Ulla Ruotsalainen (SCIA, 2009)

Segmentation of Striatal Brain Structures from High Resolution PET Images. - Ricardo J. P. C. Farinha; Ulla Ruotsalainen; Jussi Hirvonen; Lauri Tuominen; Jarmo Hietala; José M. Fonseca 001; Jussi Tohka (Int. J. Biomed. Imaging, 2009)

Automatic cerebral and cerebellar hemisphere segmentation in 3D MRI: Adaptive disconnection algorithm. - Lu Zhao; Ulla Ruotsalainen; Jussi Hirvonen; Jarmo Hietala; Jussi Tohka (Medical Image Anal., 2010)

Hierarchical classification of dynamically varying radar pulse repetition interval modulation patterns. - Jukka-Pekka Kauppi; Kalle Martikainen; Ulla Ruotsalainen (Neural Networks, 2010)

ICA based automatic segmentation of dynamic H215 O cardiac PET images. - Margarita Magadán-Méndez; Anu Juslin; Sergey V. Nesterov; Kari Kalliokoski; Juhani Knuuti; Ulla Ruotsalainen (IEEE Trans. Inf. Technol. Biomed., 2010)

Gap-Filling for the High-Resolution PET Sinograms With a Dedicated DCT-Domain Filter. - Uygar Tuna; Sari Peltonen; Ulla Ruotsalainen (IEEE Trans. Medical Imaging, 2010)

Survey: gap-filling methods for the positron emission tomograph sinograms. - Uygar Tuna; Sari Peltonen; Ulla Ruotsalainen (ISABEL, 2011)

Imaging brain change across different time scales. - Jussi Tohka; Ulla Ruotsalainen (Frontiers Neuroinformatics, 2012)

AvanTomography: A compact module for positron emission mammography. - Defne Us; Amalia Moreno-Galera; Sanaz Nazari-Farsani; Karri T. Palovuori; Heikki Kosola; Tiziana Zedda; Ulla Ruotsalainen (MeMeA, 2015)

Automatic Classification of Z-ring Formation Stages at the Single Cell Level in Escherichia Coli by Machine Learning. - Marzieh Zare; Ramakanth Neeli-Venkata; Leonardo Martins; Sari Peltonen; Ulla Ruotsalainen; Andre S. Ribeiro (BIOIMAGING, 2017)

Local Adaptive Wiener Filtering for Class Averaging in Single Particle Reconstruction. - Ali Abdollahzadeh; Erman Acar; Sari Peltonen; Ulla Ruotsalainen (SCIA (2), 2017)