Opinion and Emotion Mining for Pakistan General Election 2018 on Twitter Data. - Suleman Khan 003; Syed Atif Moqurrab; Rotaba Sehar; Umair Ayub (INTAP, 2018)

AMclr: an improved ant-miner to extract comprehensible and diverse classification rules. - Umair Ayub; Asim Ikram; Waseem Shahzad (GECCO, 2019)

PRRAT_AM - An advanced ant-miner to extract accurate and comprehensible classification rules. - Umair Ayub; Hammad Naveed; Waseem Shahzad (Appl. Soft Comput., 2020)

SAlign-a structure aware method for global PPI network alignment. - Umair Ayub; Imran Haider; Hammad Naveed (BMC Bioinform., 2020)

An Accurate Deep Learning Model for Clinical Entity Recognition From Clinical Notes. - Syed Atif Moqurrab; Umair Ayub; Adeel Anjum; Sohail Asghar; Gautam Srivastava 001 (IEEE J. Biomed. Health Informatics, 2021)

Collaborative large language models for automated data extraction in living systematic reviews. - Muhammad Ali Khan; Umair Ayub; Syed Arsalan Ahmed Naqvi; Kaneez Zahra Rubab Khakwani; Zaryab bin Riaz Sipra; Ammad Raina; Sihan Zhou; Huan He; Amir Saeidi; Bashar Hasan; Robert Bryan Rumble; Danielle S. Bitterman; et al. (J. Am. Medical Informatics Assoc., 2025)

ASAQ - Ant-Miner: optimized rule-based classifier. - Umair Ayub; Bushra Almas (Soft Comput., 2025)