A Benchmark of Entropy Coders for the Compression of Genome Sequencing Data. - Simone Casale-Brunet; Paolo Ribeca; Claudio Alberti; Unsal Ozturk; Marco Mattavelli (DCC, 2022)

MPEG-G Reference-Based Compression of Unaligned Reads Through Ultra-Fast Alignments. - Unsal Ozturk; Simone Casale-Brunet; Paolo Ribeca; Marco Mattavelli (DCC, 2022)

FM-Directories: Extending the Burrows-Wheeler Transform for String Labeled Vertex Graphs of (Almost) Arbitrary Topology. - Unsal Ozturk; Paolo Ribeca; Marco Mattavelli (DCC, 2023)

Efficient Neural Clustering and Compression of Strings Through Approximate Euclidean Embeddings of the Levenshtein Distance. - Ünsal Öztürk; Utku Görkem Ertürk; Simone Casale-Brunet; Paolo Ribeca; Marco Mattavelli (DCC, 2024)