TIGR Gene Indices clustering tools (TGICL): a software system for fast clustering of large EST datasets. - Geo Pertea; Xiaoqiu Huang 001; Feng Liang; Valentin Antonescu; Razvan Sultana; Svetlana Karamycheva; Yuandan Lee; Joseph White; Foo Cheung; Babak Parvizi; Jennifer Tsai; John Quackenbush (Bioinform., 2003)

The TIGR Gene Indices: clustering and assembling EST and known genes and integration with eukaryotic genomes. - Yuandan Lee; Jennifer Tsai; S. Sunkara; Svetlana Karamycheva; Geo Pertea; Razvan Sultana; Valentin Antonescu; Agnes P. Chan; Foo Cheung; John Quackenbush (Nucleic Acids Res., 2005)

Scaling read aligners to hundreds of threads on general-purpose processors. - Ben Langmead; Christopher Wilks; Valentin Antonescu; Rone Charles (Bioinform., 2019)