Pivoting approaches for bulk extraction of Entity-Attribute-Value data. - Valentin Dinu; Prakash M. Nadkarni; Cynthia Brandt (Comput. Methods Programs Biomed., 2006)

Guidelines for the effective use of entity-attribute-value modeling for biomedical databases. - Valentin Dinu; Prakash M. Nadkarni (Int. J. Medical Informatics, 2007)

Integrating domain knowledge with statistical and data mining methods for high-density genomic SNP disease association analysis. - Valentin Dinu; Hongyu Zhao 003; Perry L. Miller (J. Biomed. Informatics, 2007)

ICRPfinder: a fast pattern design algorithm for coding sequences and its application in finding potential restriction enzyme recognition sites. - Chao Li; Yuhua Li; Xiangmin Zhang; Phillip Stafford; Valentin Dinu (BMC Bioinform., 2009)

BING: Biomedical informatics pipeline for Next Generation Sequencing. - Jeffrey Kriseman; Christopher Busick; Szabolcs Szelinger; Valentin Dinu (J. Biomed. Informatics, 2010)

Statistical Methods for Analyzing Immunosignatures. - Justin R. Brown; Phillip Stafford; Stephen A. Johnston; Valentin Dinu (BMC Bioinform., 2011)

NGSPE: A pipeline for end-to-end analysis of DNA sequencing data and comparison between different platforms. - Ke Huang; Venkata Yellapantula; Leslie Baier; Valentin Dinu (Comput. Biol. Medicine, 2013)

High performance computing methods for the integration and analysis of biomedical data using SAS. - Justin R. Brown; Valentin Dinu (Comput. Methods Programs Biomed., 2013)

The Biological Reference Repository (BioR): a rapid and flexible system for genomics annotation. - Jean-Pierre A. Kocher; Daniel J. Quest; Patrick H. Duffy; Michael A. Meiners; Raymond M. Moore; David N. Rider; Asif Hossain; Steven N. Hart; Valentin Dinu (Bioinform., 2014)

AMASS: a database for investigating protein structures. - Clinton J. Mielke; Lawrence J. Mandarino; Valentin Dinu (Bioinform., 2014)

Differential expression of microRNAs as predictors of glioblastoma phenotypes. - Barrie S. Bradley; Joseph C. Loftus; Clinton J. Mielke; Valentin Dinu (BMC Bioinform., 2014)

BitTorious: global controlled genomics data publication, research and archiving via BitTorrent extensions. - Preston V. Lee; Valentin Dinu (BMC Bioinform., 2014)

BitTorious volunteer: server-side extensions for centrally-managed volunteer storage in BitTorrent swarms. - Preston V. Lee; Valentin Dinu (BMC Bioinform., 2015)

miR2Pathway: A novel analytical method to discover MicroRNA-mediated dysregulated pathways involved in hepatocellular carcinoma. - Chaoxing Li; Valentin Dinu (J. Biomed. Informatics, 2018)

Family Rank: a graphical domain knowledge informed feature ranking algorithm. - Michelle Saul; Valentin Dinu (Bioinform., 2021)