Coverage statistics for sequence census methods. - Steven N. Evans; Valerie Hower; Lior Pachter (BMC Bioinform., 2010)

Shape-based peak identification for ChIP-Seq. - Valerie Hower; Steven N. Evans; Lior Pachter (BMC Bioinform., 2011)

Quantifying uniformity of mapped reads. - Valerie Hower; Richard Starfield; Adam Roberts; Lior Pachter (Bioinform., 2012)