Error analysis and optimal estimation procedures in identification of nonlinear volterra systems. - Vasilis Z. Marmarelis (Autom., 1979)

Practical estimation of correlation functions of nonstationary Gaussian processes. - Vasilis Z. Marmarelis (IEEE Trans. Inf. Theory, 1983)

Processing of visual information in the distal neurons of the vertebrate retina. - John C. Curlander; Vasilis Z. Marmarelis (IEEE Trans. Syst. Man Cybern., 1983)

Identification of linear periodically time-varying systems using white-noise test inputs. - A. D. Sams; Vasilis Z. Marmarelis (Autom., 1988)

Modeling of task-dependent characteristics of human operator dynamics pursuit manual tracking. - Aiman Abdel-Malek; Vasilis Z. Marmarelis (IEEE Trans. Syst. Man Cybern., 1988)

Signal transformation and coding in neural systems. - Vasilis Z. Marmarelis (IEEE Trans. Biomed. Eng., 1989)

An artificial neural network for motion detection and speed estimation. - Spiros H. Courellis; Vasilis Z. Marmarelis (IJCNN, 1990)

On the efficacy of linear system analysis of renal autoregulation in rats. - Ki Y. Chon; Yu-Ming Chen; Niels-Henrik Holstein-Rathlou; Donald J. Marsh; Vasilis Z. Marmarelis (IEEE Trans. Biomed. Eng., 1993)

Modeling of neural systems by use of neuronal modes. - Vasilis Z. Marmarelis; Melissa Orme (IEEE Trans. Biomed. Eng., 1993)

Kernel invariance method for relating continuous-time with discrete-time nonlinear parametric models. - Xiao Zhao; Vasilis Z. Marmarelis (ICASSP (3), 1994)

Nonlinear neuronal mode analysis of action potential encoding in the cockroach tactile spine neuron. - Andrew S. French; Vasilis Z. Marmarelis (Biol. Cybern., 1995)

On the relation between continuous and discrete nonlinear parametric models. - Xiao Zhao; Vasilis Z. Marmarelis (Autom., 1997)

Volterra models and three-layer perceptrons. - Vasilis Z. Marmarelis; Xiao Zhao (IEEE Trans. Neural Networks, 1997)

Nonlinear system analysis of renal autoregulation in normotensive and hypertensive rats. - Ki H. Chon; Yu-Ming Chen; Niels-Henrik Holstein-Rathlou; Vasilis Z. Marmarelis (IEEE Trans. Biomed. Eng., 1998)

Comparative nonlinear modeling of renal autoregulation in rats: Volterra approach versus artificial neural networks. - Ki H. Chon; Niels-Henrik Holstein-Rathlou; Donald J. Marsh; Vasilis Z. Marmarelis (IEEE Trans. Neural Networks, 1998)

Decomposition of neural systems with nonlinear feedback using stimulus-response data. - Martin T. Chian; Vasilis Z. Marmarelis; Theodore W. Berger (Neurocomputing, 1999)

Modeling of nonlinear nonstationary dynamic systems with a novel class of artificial neural networks. - M. Iatrou; Theodore W. Berger; Vasilis Z. Marmarelis (IEEE Trans. Neural Networks, 1999)

A novel network for nonlinear modeling of neural systems with arbitrary point-process inputs. - Konstantinos Alataris; Theodore W. Berger; Vasilis Z. Marmarelis (Neural Networks, 2000)

Laser induced fluorescence attenuation spectroscopy: detection of hypoxia. - Ramez E. N. Shehada; Vasilis Z. Marmarelis; Hebah N. Mansour; Warren S. Grundfest (IEEE Trans. Biomed. Eng., 2000)

Brain-implantable biomimetic electronics as the next era in neural prosthetics. - Theodore W. Berger; Michel Baudry; Roberta Diaz Brinton; Jim-Shih Liaw; Vasilis Z. Marmarelis; Alex Yoondong Park; Bing J. Sheu; Armand R. Tanguay (Proc. IEEE, 2001)

Modeling nonlinear neural dynamics with Volterra-Poisson kernels. - Spiros H. Courellis; Ghassan I. Gholmieh; Vasilis Z. Marmarelis; Theodore W. Berger (IJCNN, 2004)

Volterra-Type Nonlinear Image Restoration of Medical Imagery Using Principal Dynamic Modes. - Synho Do; Vasilis Z. Marmarelis; Dae C. Shin; Jeong-Won Jeong; Tae-Seong Kim (ISBI, 2004)

3-D High Resolution Images of Ultrasonic Transmission Tomography Compared To Magnetic Resonance And Optical Images. - Jeong-Won Jeong; Dae C. Shin; Tae-Seong Kim; Chengzheng Huang; Synho Do; Manbir Singh; Vasilis Z. Marmarelis (ISBI, 2004)

Nonlinear modeling of the dynamic effects of arterial pressure and CO2 variations on cerebral blood flow in healthy humans. - Georgios D. Mitsis; Marc J. Poulin; Peter A. Robbins; Vasilis Z. Marmarelis (IEEE Trans. Biomed. Eng., 2004)

Implantable biomimetic electronics as neural prostheses for lost cognitive function. - Theodore W. Berger; John J. Granacki; Vasilis Z. Marmarelis; Armand R. Tanguay Jr.; Sam A. Deadwyler; Greg A. Gerhardt (IJCNN, 2005)

Detecting CA1 short-term plasticity variations associated with changes in stimulus intensity and extracellular medium composition. - Ghassan I. Gholmieh; Spiros H. Courellis; Vasilis Z. Marmarelis; Theodore W. Berger (Neurocomputing, 2005)

Soft tissue differentiation using multiband signatures of high resolution ultrasonic transmission tomography. - Jeong-Won Jeong; Tae-Seong Kim; Dae C. Shin; Synho Do; Manbir Singh; Vasilis Z. Marmarelis (IEEE Trans. Medical Imaging, 2005)

Modeling Hippocampal Nonlinear Dynamic Transformations with Principal Dynamic Modes. - Spiros H. Courellis; Theodoros P. Zanos; Min-Chi Hsiao; Robert E. Hampson; Sam A. Deadwyler; Vasilis Z. Marmarelis; Theodore W. Berger (EMBC, 2006)

Modeling the Nonlinear Dynamic Interactions of the Lateral and the Medial Perforant Path of the Hippocampal Dentate Gyrus. - Angelika Dimoka; Spiros H. Courellis; Vasilis Z. Marmarelis; Theodore W. Berger (EMBC, 2006)

VLSI Implementation of a Nonlinear Neuronal Model: A "Neural Prosthesis" to Restore Hippocampal Trisynaptic Dynamics. - Min-Chi Hsiao; Chiu-Hsien Chan; Vijay Srinivasan; Ashish Ahuja; Gopal Erinjippurath; Theodoros P. Zanos; Ghassan I. Gholmieh; Dong Song; Jack Wills; Jeff LaCoss; Spiros H. Courellis; Armand R. Tanguay; et al. (EMBC, 2006)

Boolean Modeling of Neural Systems with Point-Process Inputs and Outputs. - Vasilis Z. Marmarelis; Theodoros P. Zanos; Spiros H. Courellis; Theodore W. Berger (EMBC, 2006)

Physiologically Plausible Stochastic Nonlinear Kernel Models of Spike Train to Spike Train Transformation. - Dong Song; Rosa H. M. Chan; Vasilis Z. Marmarelis; Robert E. Hampson; Sam A. Deadwyler; Theodore W. Berger (EMBC, 2006)

Interaction of Short-Term Neuronal Plasticity and Synaptic Plasticity Revealed by Nonlinear Systems Analysis in Dentate Granule Cells. - Xiaping Xie; Dong Song; Zhuo Wang; Vasilis Z. Marmarelis; Theodore W. Berger (EMBC, 2006)

A multi-input modeling approach to quantify hippocampal nonlinear dynamic transformations. - Theodoros P. Zanos; Spiros H. Courellis; Robert E. Hampson; Sam A. Deadwyler; Vasilis Z. Marmarelis; Theodore W. Berger (EMBC, 2006)

Segmentation methodology for automated classification and differentiation of soft tissues in multiband images of high-resolution ultrasonic transmission tomography. - Jeong-Won Jeong; Dae C. Shin; Synho Do; Vasilis Z. Marmarelis (IEEE Trans. Medical Imaging, 2006)

Principal dynamic mode analysis of action potential firing in a spider mechanoreceptor. - Georgios D. Mitsis; Andrew S. French; Ulli Höger; Spiros H. Courellis; Vasilis Z. Marmarelis (Biol. Cybern., 2007)

Nonlinear Dynamic Modeling of Spike Train Transformations for Hippocampal-Cortical Prostheses. - Dong Song; Rosa H. M. Chan; Vasilis Z. Marmarelis; Robert E. Hampson; Sam A. Deadwyler; Theodore W. Berger (IEEE Trans. Biomed. Eng., 2007)

Modeling the Nonlinear Properties of the in vitro Hippocampal Perforant Path-Dentate System Using Multielectrode Array Technology. - Angelika Dimoka; Spiros H. Courellis; Ghassan I. Gholmieh; Vasilis Z. Marmarelis; Theodore W. Berger (IEEE Trans. Biomed. Eng., 2008)

Multi-Input, Multi-Output Nonlinear Dynamic Modeling to Identify Biologically-Based Transformations as the "Cognitive Processes" Represented by the Ensemble Coding of Neuron Populations. - Theodore W. Berger; Dong Song; Vasilis Z. Marmarelis (AAAI Fall Symposium: Biologically Inspired Cognitive Architectures, 2009)

Image fusion methodology for efficient interpretation of multiband images in 3D high-resolution ultrasonic transmission tomography. - Jeong-Won Jeong; Dae C. Shin; Vasilis Z. Marmarelis (Int. J. Imaging Syst. Technol., 2009)

Parametric and non-parametric modeling of short-term synaptic plasticity. Part I: computational study. - Dong Song; Vasilis Z. Marmarelis; Theodore W. Berger (J. Comput. Neurosci., 2009)

Parametric and non-parametric modeling of short-term synaptic plasticity. Part II: Experimental study. - Dong Song; Zhuo Wang; Vasilis Z. Marmarelis; Theodore W. Berger (J. Comput. Neurosci., 2009)

Nonlinear modeling of neural population dynamics for hippocampal prostheses. - Dong Song; Rosa H. M. Chan; Vasilis Z. Marmarelis; Robert E. Hampson; Sam A. Deadwyler; Theodore W. Berger (Neural Networks, 2009)

Nonlinear Modeling of the Dynamic Effects of Infused Insulin on Glucose: Comparison of Compartmental With Volterra Models. - Georgios D. Mitsis; Mihalis G. Markakis; Vasilis Z. Marmarelis (IEEE Trans. Biomed. Eng., 2009)

The Neurobiological Basis of Cognition: Identification by Multi-Input, Multioutput Nonlinear Dynamic Modeling. - Theodore W. Berger; Dong Song; Rosa H. M. Chan; Vasilis Z. Marmarelis (Proc. IEEE, 2010)

Restorative encoding memory integrative neural device: "REMIND". - Robert E. Hampson; Vasilis Z. Marmarelis; Dae C. Shin; Greg A. Gerhardt; Dong Song; Rosa H. M. Chan; A. J. Sweatt; John J. Granacki; Theodore W. Berger; Sam A. Deadwyler (EMBC, 2011)

Diagnostic biomarkers for Alzheimer's disease using dynamic nonlinear models based on principal dynamic modes. - Vasilis Z. Marmarelis; Dae C. Shin; Ramon Diaz-Arrastia; R. Zhang (EMBC, 2011)

Dynamic nonlinear modeling of interactions between neuronal ensembles using principal dynamic modes. - Vasilis Z. Marmarelis; Dae C. Shin; Dong Song; Robert E. Hampson; Sam A. Deadwyler; Theodore W. Berger (EMBC, 2011)

Estimation and statistical validation of event-invariant nonlinear dynamic models of hippocampal CA3-CA1 population activities. - Dong Song; Rosa H. M. Chan; Vasilis Z. Marmarelis; Robert E. Hampson; Sam A. Deadwyler; Theodore W. Berger (EMBC, 2011)

Editorial: TBME Letters Special Issue on Multiscale Modeling and Analysis in Computational Biology and Medicine - Part-2. - Jean-Louis Coatrieux; Alejandro F. Frangi; Grace C. Y. Peng; David Z. D'Argenio; Vasilis Z. Marmarelis; Anushka Michailova (IEEE Trans. Biomed. Eng., 2011)

Editorial: Special Issue on Multiscale Modeling and Analysis in Computational Biology and Medicine - Part-1. - Alejandro F. Frangi; Jean-Louis Coatrieux; Grace C. Y. Peng; David Z. D'Argenio; Vasilis Z. Marmarelis; Anushka Michailova (IEEE Trans. Biomed. Eng., 2011)

Analog low-power hardware implementation of a Laguerre-Volterra model of intracellular subthreshold neuronal activity. - Viviane S. Ghaderi; Shane M. Roach; Dong Song; Vasilis Z. Marmarelis; John Choma Jr.; Theodore W. Berger (EMBC, 2012)

Functional connectivity between Layer 2/3 and Layer 5 neurons in prefrontal cortex of nonhuman primates during a delayed match-to-sample task. - Dong Song; Ioan Opris; Rosa H. M. Chan; Vasilis Z. Marmarelis; Robert E. Hampson; Sam A. Deadwyler; Theodore W. Berger (EMBC, 2012)

Conformal ceramic electrodes that record glutamate release and corresponding neural activity in primate prefrontal cortex. - Robert E. Hampson; Joshua L. Fuqua; Peter F. Huettl; Ioan Opris; Dong Song; Dae C. Shin; Vasilis Z. Marmarelis; Theodore W. Berger; Greg A. Gerhardt; Sam A. Deadwyler (EMBC, 2013)

A nonlinear autoregressive Volterra model of the Hodgkin-Huxley equations. - Steffen E. Eikenberry; Vasilis Z. Marmarelis (J. Comput. Neurosci., 2013)

Nonlinear modeling of dynamic interactions within neuronal ensembles using Principal Dynamic Modes. - Vasilis Z. Marmarelis; Dae C. Shin; Dong Song; Robert E. Hampson; Sam A. Deadwyler; Theodore W. Berger (J. Comput. Neurosci., 2013)

Identification of sparse neural functional connectivity using penalized likelihood estimation and basis functions. - Dong Song; Haonan Wang; Catherine Y. Tu; Vasilis Z. Marmarelis; Robert E. Hampson; Sam A. Deadwyler; Theodore W. Berger (J. Comput. Neurosci., 2013)

On parsing the neural code in the prefrontal cortex of primates using principal dynamic modes. - Vasilis Z. Marmarelis; Dae C. Shin; Dong Song; Robert E. Hampson; Sam A. Deadwyler; Theodore W. Berger (J. Comput. Neurosci., 2014)

Time-Varying Modeling of Cerebral Hemodynamics. - Vasilis Z. Marmarelis; Dae C. Shin; Melissa Orme; Rong Zhang 009 (IEEE Trans. Biomed. Eng., 2014)

Sparse generalized volterra model of human hippocampal spike train transformation for memory prostheses. - Dong Song; Brian S. Robinson; Robert E. Hampson; Vasilis Z. Marmarelis; Sam A. Deadwyler; Theodore W. Berger (EMBC, 2015)

Nonlinear dynamical modeling of human hippocampal CA3-CA1 functional connectivity for memory prostheses. - Dong Song; Robert E. Hampson; Brian S. Robinson; Ioan Opris; Vasilis Z. Marmarelis; Sam A. Deadwyler; Theodore W. Berger (NER, 2015)

Compartmental and Data-Based Modeling of Cerebral Hemodynamics: Linear Analysis. - Brandon C. Henley; Dae C. Shin; Rong Zhang 009; Vasilis Z. Marmarelis (IEEE Access, 2015)

Principal Dynamic Mode Analysis of the Hodgkin-Huxley Equations. - Steffen E. Eikenberry; Vasilis Z. Marmarelis (Int. J. Neural Syst., 2015)

Model-based asessment of an in-vivo predictive relationship from CA1 to CA3 in the rodent hippocampus. - Roman A. Sandler; Dong Song; Robert E. Hampson; Sam A. Deadwyler; Theodore W. Berger; Vasilis Z. Marmarelis (J. Comput. Neurosci., 2015)

Decoding memory features from hippocampal spiking activities using sparse classification models. - Dong Song; Robert E. Hampson; Brian S. Robinson; Vasilis Z. Marmarelis; Sam A. Deadwyler; Theodore W. Berger (EMBC, 2016)

Calibration of a microdialysis sensor and recursive glucose level estimation in ICU patients using Kalman and particle filtering. - Alexandros C. Charalampidis; Konstantinos Pontikis; Georgios D. Mitsis; George Dimitriadis; Vaia Lampadiari; Vasilis Z. Marmarelis; Apostolos Armaganidis; George P. Papavassilopoulos (Biomed. Signal Process. Control., 2016)

Multiscale modeling in the clinic: diseases of the brain and nervous system. - William W. Lytton; Jeff Arle; Georgiy V. Bobashev; Songbai Ji; Tara L. Klassen; Vasilis Z. Marmarelis; James S. Schwaber; Mohamed A. Sherif; Terence D. Sanger (Brain Informatics, 2017)

Nonparametric Model of Smooth Muscle Force Production During Electrical Stimulation. - Marc Cole; Steffen E. Eikenberry; Takahide Kato; Roman A. Sandler; Stanley M. Yamashiro; Vasilis Z. Marmarelis (J. Comput. Biol., 2017)

Cannabinoids disrupt memory encoding by functionally isolating hippocampal CA1 from CA3. - Roman A. Sandler; Dustin Fetterhoff; Robert E. Hampson; Sam A. Deadwyler; Vasilis Z. Marmarelis (PLoS Comput. Biol., 2017)

Compartmental and Data-Based Modeling of Cerebral Hemodynamics: Nonlinear Analysis. - Brandon C. Henley; Dae C. Shin; Rong Zhang 009; Vasilis Z. Marmarelis (IEEE Trans. Biomed. Eng., 2017)

Methodology of Recurrent Laguerre-Volterra Network for Modeling Nonlinear Dynamic Systems. - Kunling Geng; Vasilis Z. Marmarelis (IEEE Trans. Neural Networks Learn. Syst., 2017)

Mechanism-Based and Input-Output Modeling of the Key Neuronal Connections and Signal Transformations in the CA3-CA1 Regions of the Hippocampus. - Kunling Geng; Dae C. Shin; Dong Song; Robert E. Hampson; Sam A. Deadwyler; Theodore W. Berger; Vasilis Z. Marmarelis (Neural Comput., 2018)

Designing Patient-Specific Optimal Neurostimulation Patterns for Seizure Suppression. - Roman A. Sandler; Kunling Geng; Dong Song; Robert E. Hampson; Mark R. Witcher; Sam A. Deadwyler; Theodore W. Berger; Vasilis Z. Marmarelis (Neural Comput., 2018)

Closed-loop modeling of the heart-rate reflex for improved diagnosis and monitoring of Mild Cognitive Impairment. - Vasilis Z. Marmarelis; Dae C. Shin; Rong Zhang 009 (EMBC, 2019)

Multi-Input, Multi-Output Neuronal Mode Network Approach to Modeling the Encoding Dynamics and Functional Connectivity of Neural Systems. - Kunling Geng; Dae C. Shin; Dong Song; Robert E. Hampson; Samuel A. Deadwyler; Theodore W. Berger; Vasilis Z. Marmarelis (Neural Comput., 2019)

Closed-Loop Dynamic Modeling of the Heart-Rate Reflex to Concurrent Spontaneous Changes of Arterial Blood Pressure and CO2 Tension: Quantification of the Effects of Mild Cognitive Impairment. - Vasilis Z. Marmarelis; Dae C. Shin; Rong Zhang 009 (IEEE Trans. Biomed. Eng., 2021)

Developing a hippocampal neural prosthetic to facilitate human memory encoding and recall of stimulus features and categories. - Brent M. Roeder; Xiwei She; Alexander S. Dakos; Bryan Moore; Robert T. Wicks; Mark R. Witcher; Daniel E. Couture; Adrian W. Laxton; Heidi M. Munger Clary; Gautam Popli; Charles Liu; Brian Lee; et al. (Frontiers Comput. Neurosci., 2024)