STON: exploring biological pathways using the SBGN standard and graph databases. - Vasundra Touré; Alexander Mazein; Dagmar Waltemath; Irina Balaur; Mansoor A. S. Saqi; Ron Henkel; Johann Pellet; Charles Auffray (BMC Bioinform., 2016)

Toward Community Standards and Software for Whole-Cell Modeling. - Dagmar Waltemath; Jonathan R. Karr; Frank T. Bergmann; Vijayalakshmi Chelliah; Michael Hucka; Marcus Krantz; Wolfram Liebermeister; Pedro Mendes 001; Chris J. Myers; Pinar Pir; Begum Alaybeyoglu; Naveen K. Aranganathan; et al. (IEEE Trans. Biomed. Eng., 2016)

Evolution of computational models in BioModels Database and the Physiome Model Repository. - Martin Scharm; Tom Gebhardt; Vasundra Touré; Andrea Bagnacani; Ali Salehzadeh-Yazdi; Olaf Wolkenhauer; Dagmar Waltemath (BMC Syst. Biol., 2018)

Quick tips for creating effective and impactful biological pathways using the Systems Biology Graphical Notation. - Vasundra Touré; Nicolas Le Novère; Dagmar Waltemath; Olaf Wolkenhauer (PLoS Comput. Biol., 2018)

Harmonizing semantic annotations for computational models in biology. - Maxwell Lewis Neal; Matthias König 003; David P. Nickerson; Goksel Misirli; Reza Kalbasi; Andreas Dräger; Koray Atalag; Vijayalakshmi Chelliah; Michael T. Cooling; Daniel L. Cook; Sharon M. Crook; Miguel de Alba; et al. (Briefings Bioinform., 2019)

CausalTAB: the PSI-MITAB 2.8 updated format for signalling data representation and dissemination. - Livia Perfetto; Marcio Luis Acencio; Glyn Bradley; Gianni Cesareni; Noemi del-Toro; Dávid Fazekas; Henning Hermjakob; Tamás Korcsmáros; Martin Kuiper; Astrid Lægreid; Prisca Lo Surdo; Ruth C. Lovering; et al. (Bioinform., 2019)

Systems Biology Graphical Notation: Process Description language Level 1 Version 2.0. - Adrien Rougny; Vasundra Touré; Stuart L. Moodie; Irina Balaur; Tobias Czauderna; Hanna Borlinghaus; Ugur Dogrusoz; Alexander Mazein; Andreas Dräger; Michael L. Blinov; Alice Villéger; Robin Haw; et al. (J. Integr. Bioinform., 2019)

Systems biology graphical notation markup language (SBGNML) version 0.3. - Frank T. Bergmann; Tobias Czauderna; Ugur Dogrusoz; Adrien Rougny; Andreas Dräger; Vasundra Touré; Alexander Mazein; Michael L. Blinov; Augustin Luna (J. Integr. Bioinform., 2020)

Setting the basis of best practices and standards for curation and annotation of logical models in biology - highlights of the [BC]2 2019 CoLoMoTo/SysMod Workshop. - Anna Niarakis; Martin Kuiper; Marek Ostaszewski; Rahuman S. Malik-Sheriff; Cristina Casals-Casas; Denis Thieffry; Tom C. Freeman; Paul D. Thomas; Vasundra Touré; Vincent Noël; Gautier Stoll; Julio Saez-Rodriguez; et al. (Briefings Bioinform., 2021)

SBGN Bricks Ontology as a tool to describe recurring concepts in molecular networks. - Adrien Rougny; Vasundra Touré; John Albanese; Dagmar Waltemath; Denis Shirshov; Anatoly A. Sorokin; Gary D. Bader; Michael L. Blinov; Alexander Mazein (Briefings Bioinform., 2021)

The status of causality in biological databases: data resources and data retrieval possibilities to support logical modeling. - Vasundra Touré; Åsmund Flobak; Anna Niarakis; Steven Vercruysse; Martin Kuiper (Briefings Bioinform., 2021)

CausalBuilder: bringing the MI2CAST causal interaction annotation standard to the curator. - Vasundra Touré; John Zobolas; Martin Kuiper; Steven Vercruysse (Database J. Biol. Databases Curation, 2021)

The Minimum Information about a Molecular Interaction CAusal STatement (MI2CAST). - Vasundra Touré; Steven Vercruysse; Marcio Luis Acencio; Ruth C. Lovering; Sandra E. Orchard; Glyn Bradley; Cristina Casals-Casas; Claudine Chaouiya; Noemi del-Toro; Åsmund Flobak; Pascale Gaudet; Henning Hermjakob; et al. (Bioinform., 2021)

UniBioDicts: Unified access to Biological Dictionaries. - John Zobolas; Vasundra Touré; Martin Kuiper; Steven Vercruysse (Bioinform., 2021)

The SPHN Ecosystem towards FAIR Data. - Sabine Österle; Vasundra Touré; Katrin Crameri (SWAT4HCLS, 2022)

GraphML-SBGN bidirectional converter for metabolic networks. - Irina Balaur; Ludovic Roy; Vasundra Touré; Alexander Mazein; Charles Auffray (J. Integr. Bioinform., 2022)

Bridging clinical and genomic knowledge: An extension of the SPHN RDF Schema for seamless integration and FAIRification of omics data. - Eelke van der Horst; Deepak R. Unni; Femke C. Kopmels; Jan Armida; Vasundra Touré; Wouter Franke; Katrin Crameri; Elisa Cirillo; Sabine Österle (SWAT4HCLS, 2024)

SPHN strategy to unravel the semantic drift between versions of standard terminologies. - Deepak R. Unni; Vasundra Touré; Philip Krauss; Katrin Crameri; Sabine Österle (SWAT4HCLS, 2024)