The ERGOTM genome analysis and discovery system. - Ross A. Overbeek; Niels Larsen; Theresa Walunas; Mark D'Souza; Gordon D. Pusch; Evgeni Selkov Jr.; Konstantinos Liolios; Viktor Joukov; Denis Kaznadzey; Iain Anderson; Anamitra Bhattacharyya; Henry Burd; et al. (Nucleic Acids Res., 2003)

The National Microbial Pathogen Database Resource (NMPDR): a genomics platform based on subsystem annotation. - Leslie Klis McNeil; Claudia Reich; Ramy K. Aziz; Daniela Bartels; Matthew Cohoon; Terry Disz; Robert A. Edwards; Svetlana Gerdes; Kaitlyn Hwang; Michael Kubal; Gohar Rem Margaryan; Folker Meyer; et al. (Nucleic Acids Res., 2007)

Accessing the SEED genome databases via Web services API: tools for programmers. - Terry Disz; Sajia Akhter; Daniel Cuevas; Robert Olson; Ross A. Overbeek; Veronika Vonstein; Rick Stevens; Robert A. Edwards (BMC Bioinform., 2010)

Real Time Metagenomics: Using k-mers to annotate metagenomes. - Robert A. Edwards; Robert Olson; Terry Disz; Gordon D. Pusch; Veronika Vonstein; Rick Stevens; Ross A. Overbeek (Bioinform., 2012)

The SEED and the Rapid Annotation of microbial genomes using Subsystems Technology (RAST). - Ross A. Overbeek; Robert Olson; Gordon D. Pusch; Gary J. Olsen; James J. Davis 002; Terry Disz; Robert A. Edwards; Svetlana Gerdes; Bruce D. Parrello; Maulik Shukla; Veronika Vonstein; Alice R. Wattam; et al. (Nucleic Acids Res., 2014)

PATRIC, the bacterial bioinformatics database and analysis resource. - Alice R. Wattam; David Abraham; Oral Dalay; Terry Disz; Timothy Driscoll; Joseph L. Gabbard; Joseph J. Gillespie; Roger Gough; Deborah Hix; Ronald W. Kenyon; Dustin Machi; Chunhong Mao; et al. (Nucleic Acids Res., 2014)

Improvements to PATRIC, the all-bacterial Bioinformatics Database and Analysis Resource Center. - Alice R. Wattam; James J. Davis 002; Rida Assaf; Sébastien Boisvert; Thomas S. Brettin; Christopher Bun; Neal Conrad; Emily M. Dietrich; Terry Disz; Joseph L. Gabbard; Svetlana Gerdes; Christopher S. Henry; et al. (Nucleic Acids Res., 2017)

PATRIC as a unique resource for studying antimicrobial resistance. - Dionysios A. Antonopoulos; Rida Assaf; Ramy Karam Aziz; Thomas S. Brettin; Christopher Bun; Neal Conrad; James J. Davis 002; Emily M. Dietrich; Terry Disz; Svetlana Gerdes; Ronald W. Kenyon; Dustin Machi; et al. (Briefings Bioinform., 2019)

A machine learning-based service for estimating quality of genomes using PATRIC. - Bruce D. Parrello; Rory Butler; Philippe Chlenski; Robert Olson; Jamie C. Overbeek; Gordon D. Pusch; Veronika Vonstein; Ross A. Overbeek (BMC Bioinform., 2019)

The PATRIC Bioinformatics Resource Center: expanding data and analysis capabilities. - James J. Davis 002; Alice R. Wattam; Ramy K. Aziz; Thomas S. Brettin; Ralph Butler; Rory Butler; Philippe Chlenski; Neal Conrad; Allan Dickerman; Emily M. Dietrich; Joseph L. Gabbard; Svetlana Gerdes; et al. (Nucleic Acids Res., 2020)

A genomic data resource for predicting antimicrobial resistance from laboratory-derived antimicrobial susceptibility phenotypes. - Margo VanOeffelen; Marcus Nguyen; Derya Aytan-Aktug; Thomas S. Brettin; Emily M. Dietrich; Ronald W. Kenyon; Dustin Machi; Chunhong Mao; Robert Olson; Gordon D. Pusch; Maulik Shukla; Rick Stevens; et al. (Briefings Bioinform., 2021)

Introducing the Bacterial and Viral Bioinformatics Resource Center (BV-BRC): a resource combining PATRIC, IRD and ViPR. - Robert D. Olson; Rida Assaf; Thomas S. Brettin; Neal Conrad; Clark Cucinell; James J. Davis 002; Donald M. Dempsey; Allan Dickerman; Emily M. Dietrich; Ronald W. Kenyon; Mehmet Kuscuoglu; Elliot J. Lefkowitz; et al. (Nucleic Acids Res., 2023)