Gene Mapping by Haplotype Pattern Mining. - Hannu Toivonen; Paivi Onkamo; Kari Vasko; Vesa Ollikainen; Petteri Sevon; Heikki Mannila; Juha Kere (BIBE, 2000)

TreeDT: gene mapping by tree disequilibrium test. - Petteri Sevon; Hannu Toivonen; Vesa Ollikainen (KDD, 2001)

TreeDT: Tree Pattern Mining for Gene Mapping. - Petteri Sevon; Hannu Toivonen; Vesa Ollikainen (IEEE ACM Trans. Comput. Biol. Bioinform., 2006)

PairsDB atlas of protein sequence space. - Andreas Heger; Eija Korpelainen; Taavi Hupponen; Kimmo Mattila; Vesa Ollikainen; Liisa Holm (Nucleic Acids Res., 2008)