The Biodegradation Network, a New Scenario for Computational Systems Biology Research. - Florencio Pazos; David Guijas; Manuel J. Gómez; Almudena Trigo; Victor de Lorenzo; Alfonso Valencia (CMSB, 2004)

MetaRouter: bioinformatics for bioremediation. - Florencio Pazos; David Guijas; Alfonso Valencia; Victor de Lorenzo (Nucleic Acids Res., 2005)

Synthetic Biology: challenges ahead. - Victor de Lorenzo; Luis Serrano; Alfonso Valencia (Bioinform., 2006)

EnvMine: A text-mining system for the automatic extraction of contextual information. - Javier Tamames; Victor de Lorenzo (BMC Bioinform., 2010)

The logic layout of the TOL network of Pseudomonas putida pWW0 plasmid stems from a metabolic amplifier motif (MAM) that optimizes biodegradation of m-xylene. - Rafael Silva-Rocha; Hidde de Jong; Javier Tamames; Víctor de Lorenzo (BMC Syst. Biol., 2011)

Modeling and analysis of flux distributions in the two branches of the phosphotransferase system in Pseudomonas putida. - Andreas Kremling; Katharina Pflüger-Grau; Max Chavarría; Jacek Puchalka; Vítor A. P. Martins dos Santos; Victor de Lorenzo (BMC Syst. Biol., 2012)

Bacteria as Computers: Formalizing Transcriptional Regulatory Networks by Way of Digital Logic Circuits. - Rafael Silva-Rocha; Victor de Lorenzo (Int. J. Unconv. Comput., 2012)

The Standard European Vector Architecture (SEVA): a coherent platform for the analysis and deployment of complex prokaryotic phenotypes. - Rafael Silva-Rocha; Esteban Martínez-García; Belén Calles; Max Chavarría; Alejandro Arce-Rodríguez; Aitor de las Heras; A. David Páez-Espino; Gonzalo Durante-Rodríguez; Juhyun Kim; Pablo I. Nikel; Raúl Platero; Victor de Lorenzo (Nucleic Acids Res., 2013)

SEVA 2.0: an update of the Standard European Vector Architecture for de-/re-construction of bacterial functionalities. - Esteban Martínez-García; Tomás Aparicio; Ángel Goñi-Moreno; Sofía Fraile; Víctor de Lorenzo (Nucleic Acids Res., 2015)

Exploiting geometric similarity for statistical quantification of fluorescence spatial patterns in bacterial colonies. - David R. Espeso; Elena Algar; Esteban Martínez-García; Víctor de Lorenzo (BMC Bioinform., 2020)

SEVA 3.0: an update of the Standard European Vector Architecture for enabling portability of genetic constructs among diverse bacterial hosts. - Esteban Martínez-García; Ángel Goñi-Moreno; Bryan Bartley; James Alastair McLaughlin; Lucas Sánchez-Sampedro; Héctor Pascual del Pozo; Clara Prieto Hernández; Ada Serena Marletta; Davide De Lucrezia; Guzmán Sánchez-Fernández; Sofía Fraile; Víctor de Lorenzo (Nucleic Acids Res., 2020)

SEVA 4.0: an update of the Standard European Vector Architecture database for advanced analysis and programming of bacterial phenotypes. - Esteban Martínez-García; Sofía Fraile; Elena Algar; Tomás Aparicio; Elena Velázquez; Belén Calles; Huseyin Tas; Blas Blázquez; Bruno Martín; Clara Prieto; Lucas Sánchez-Sampedro; Morten h H. Nørholm; et al. (Nucleic Acids Res., 2023)