Investigating extended regulatory regions of genomic DNA sequences. - Vladimir N. Babenko; P. S. Kosarev; Oleg V. Vishnevsky; Victor G. Levitsky; V. V. Basin; Anatoly S. Frolov (Bioinform., 1999)

Nucleosomal DNA property database. - Victor G. Levitsky; Mikhail P. Ponomarenko; Julia V. Ponomarenko; Anatoly S. Frolov; Nikolay A. Kolchanov (Bioinform., 1999)

Nucleosome formation potential of eukaryotic DNA: calculation and promoters analysis. - Victor G. Levitsky; Olga A. Podkolodnaya; Nikolay A. Kolchanov; Nikolay L. Podkolodny (Bioinform., 2001)

Nucleosome formation potential of exons, introns, and Alu repeats. - Victor G. Levitsky; Olga A. Podkolodnaya; Nikolay A. Kolchanov; Nikolay L. Podkolodny (Bioinform., 2001)

Recognition of eukaryotic promoters using a genetic algorithm based on iterative discriminant analysis. - Victor G. Levitsky; Alexey V. Katokhin (Silico Biol., 2003)

RECON: a program for prediction of nucleosome formation potential. - Victor G. Levitsky (Nucleic Acids Res., 2004)

NPRD: Nucleosome Positioning Region Database. - Victor G. Levitsky; Aleksey V. Katokhin; Olga A. Podkolodnaya; Dagmara P. Furman; Nikolay A. Kolchanov (Nucleic Acids Res., 2005)

Combined experimental and computational approaches to study the regulatory elements in eukaryotic genes. - Nikolay A. Kolchanov; Tatyana I. Merkulova; Elena V. Ignatieva; Elena A. Ananko; Dmitry Yu. Oshchepkov; Victor G. Levitsky; Gennady V. Vasiliev; Nataly V. Klimova; Vasily M. Merkulov; T. Charles Hodgman (Briefings Bioinform., 2007)

Effective transcription factor binding site prediction using a combination of optimization, a genetic algorithm and discriminant analysis to capture distant interactions. - Victor G. Levitsky; Elena V. Ignatieva; Elena A. Ananko; Igor I. Turnaev; Tatyana I. Merkulova; Nikolay A. Kolchanov; T. Charles Hodgman (BMC Bioinform., 2007)

ExpertDiscovery system application for the hierarchical analysis of eukaryotic transcription regulatory regions based on DNA codes of transcription. - I. V. Khomicheva; Evgenii E. Vityaev 001; Elena A. Ananko; T. I. Shipilov; Victor G. Levitsky (Intell. Data Anal., 2008)

Genetic algorithm and optimized weight matrix application for peroxisome proliferator response elements recognition: Prerequisites of accuracy growth for wide genome research. - Victor G. Levitsky; Elena V. Ignatieva; Eugenia Aman; Tatyana I. Merkulova; Nikolay A. Kolchanov; T. Charles Hodgman (Intell. Data Anal., 2008)

Learning Advanced TFBS Models from Chip-Seq Data - diChIPMunk: Effective Construction of Dinucleotide Positional Weight Matrices. - Ivan V. Kulakovskiy; Victor G. Levitsky; Dmitry G. Oschepkov; Ilya E. Vorontsov; Vsevolod J. Makeev (BIOINFORMATICS, 2013)

From binding motifs in Chip-seq Data to Improved Models of transcription factor binding Sites. - Ivan V. Kulakovskiy; Victor G. Levitsky; Dmitry Yu. Oshchepkov; Leonid Bryzgalov; Ilya E. Vorontsov; Vsevolod J. Makeev (J. Bioinform. Comput. Biol., 2013)

Hidden heterogeneity of transcription factor binding sites: A case study of SF-1. - Victor G. Levitsky; Dmitry Yu. Oshchepkov; Nataly V. Klimova; Elena V. Ignatieva; Gennady V. Vasiliev; Vasily M. Merkulov; Tatyana I. Merkulova (Comput. Biol. Chem., 2016)

Meta-analysis of transcriptome data identified TGTCNN motif variants associated with the response to plant hormone auxin in Arabidopsis thaliana L.. - Elena V. Zemlyanskaya; Daniil S. Wiebe; Nadezda A. Omelyanchuk; Victor G. Levitsky; Victoria V. Mironova (J. Bioinform. Comput. Biol., 2016)