Signal search analysis server. - Giovanna Ambrosini; Viviane Praz; Vidhya Jagannathan; Philipp Bucher (Nucleic Acids Res., 2003)

CleanEx: a database of heterogeneous gene expression data based on a consistent gene nomenclature. - Viviane Praz; Vidhya Jagannathan; Philipp Bucher (Nucleic Acids Res., 2004)

HTPSELEX - a database of high-throughput SELEX libraries for transcription factor binding sites. - Vidhya Jagannathan; Emmanuelle Roulet; Mauro Delorenzi; Philipp Bucher (Nucleic Acids Res., 2006)

Meta-analysis of estrogen response in MCF-7 distinguishes early target genes involved in signaling and cell proliferation from later target genes involved in cell cycle and DNA repair. - Vidhya Jagannathan; Marc Robinson-Rechavi (BMC Syst. Biol., 2011)