Human protein reference database as a discovery resource for proteomics. - Suraj Peri; J. Daniel Navarro; Troels Z. Kristiansen; Ramars Amanchy; Vineeth Surendranath; Babylakshmi Muthusamy; T. K. B. Gandhi; K. N. Chandrika; Nandan Deshpande; Shubha Suresh; B. P. Rashmi; K. Shanker; et al. (Nucleic Acids Res., 2004)

A systematic bioinformatics approach for selection of target and screening of ligand for malignant tumours suppressing APG4A gene on Xq22.1. - Vidya Niranjan; R. Seenivasagam; G. Sivakumar (Int. J. Comput. Biol. Drug Des., 2010)

Prediction of disease causing gene in Xq22.1 region of human X-chromosome. - Vidya Niranjan; Riaz Ahmed; R. Seenivasagam; G. Sivakumar (Int. J. Bioinform. Res. Appl., 2011)

Discovering novel carriers for oral insulin tablets: a pharmacoinformatics approach. - R. Seenivasagam; K. Hemavathi; G. Sivakumar; Vidya Niranjan (Int. J. Bioinform. Res. Appl., 2013)

Structural and molecular basis of the interaction mechanism of selected drugs towards multiple targets of SARS-CoV-2 by molecular docking and dynamic simulation studies- deciphering the scope of repurposed drugs. - Sinosh Skariyachan; Dharshini Gopal; Shweta Chakrabarti; Priya Kempanna; Akshay Uttarkar; Aditi G. Muddebihalkar; Vidya Niranjan (Comput. Biol. Medicine, 2020)

Structural insights on the interaction potential of natural leads against major protein targets of SARS-CoV-2: Molecular modelling, docking and dynamic simulation studies. - Sinosh Skariyachan; Dharshini Gopal; Aditi G. Muddebihalkar; Akshay Uttarkar; Vidya Niranjan (Comput. Biol. Medicine, 2021)

Implementation of ensemble machine learning algorithms on exome datasets for predicting early diagnosis of cancers. - Abdu Rehaman Pasha Syed; Rahul Anbalagan; Anagha S. Setlur; Chandrashekar Karunakaran; Jyoti Shetty; Jitendra Kumar; Vidya Niranjan (BMC Bioinform., 2022)

Carboxymuconolactone decarboxylase is a prospective molecular target for multi-drug resistant Acinetobacter baumannii-computational modeling, molecular docking and dynamic simulation studies. - Shraddha Rana; Sinosh Skariyachan; Akshay Uttarkar; Vidya Niranjan (Comput. Biol. Medicine, 2023)

Computational molecular perspectives on novel carbazole derivative as an anti-cancer molecule against CDK1 of breast and colorectal cancers via gene expression studies, novel two-way docking strategies, molecular mechanics and dynamics. - Eashita Suvarna; Anagha S. Setlur; Chandrashekar K; Sridharan M; Vidya Niranjan (Comput. Biol. Chem., 2024)

A comparative insight into peptide folding with quantum CVaR-VQE algorithm, MD simulations and structural alphabet analysis. - Akshay Uttarkar; Vidya Niranjan (Quantum Inf. Process., 2024)