Extending assembly of short DNA sequences to handle error. - William R. Jeck; Josephine A. Reinhardt; David A. Baltrus; Matthew T. Hickenbotham; Vincent J. Magrini; Elaine R. Mardis; Jeffery L. Dangl; Corbin D. Jones (Bioinform., 2007)

Gallus GBrowse: a unified genomic database for the chicken. - Carl J. Schmidt; Michael Romanov; Oliver Ryder; Vincent J. Magrini; Matthew T. Hickenbotham; Jarret Glasscock; Sean McGrath 003; Elaine R. Mardis; Lincoln D. Stein (Nucleic Acids Res., 2008)

SLOPE: a quick and accurate method for locating non-SNP structural variation from targeted next-generation sequence data. - Haley J. Abel; Eric J. Duncavage; Nils Becker; Jon R. Armstrong; Vincent J. Magrini; John D. Pfeifer (Bioinform., 2010)

Genome Modeling System: A Knowledge Management Platform for Genomics. - Malachi Griffith; Obi L. Griffith; Scott M. Smith; Avinash Ramu; Matthew B. Callaway; Anthony M. Brummett; Michael J. Kiwala; Adam C. Coffman; Allison A. Regier; Benjamin J. Oberkfell; Gabriel E. Sanderson; Thomas P. Mooney; et al. (PLoS Comput. Biol., 2015)