simpleCache: R caching for reproducible, distributed, large-scale projects. - Nathan C. Sheffield; V. P. Nagraj; Vincent P. Reuter (J. Open Source Softw., 2018)

GEOfetch: a command-line tool for downloading data and standardized metadata from GEO and SRA. - Oleksandr Khoroshevskyi; Nathan Leroy; Vincent P. Reuter; Nathan C. Sheffield (Bioinform., 2023)