Rational Design of Chymotrypsin Inhibitor 2 by Optimizing Non-Native Interactions. - Fernando Bruno da Silva; Vinícius Martins de Oliveira; Murilo Nogueira Sanches; Vinícius G. Contessoto; Vitor B. P. Leite (J. Chem. Inf. Model., 2020)

AWSEM-Suite: a protein structure prediction server based on template-guided, coevolutionary-enhanced optimized folding landscapes. - Shikai Jin; Vinícius G. Contessoto; Mingchen Chen; Nicholas P. Schafer; Wei Lu; Xun Chen; Carlos Bueno; Arya Hajitaheri; Brian J. Sirovetz; Aram Davtyan; Garegin A. Papoian; Min-Yeh Tsai; et al. (Nucleic Acids Res., 2020)

The Nucleome Data Bank: web-based resources to simulate and analyze the three-dimensional genome. - Vinícius G. Contessoto; Ryan R. Cheng; Arya Hajitaheri; Esteban Dodero-Rojas; Matheus F. Mello; Erez Lieberman Aiden; Peter G. Wolynes; Michele Di Pierro; José N. Onuchic (Nucleic Acids Res., 2021)