Gene Networks Description and Modeling in the GeneNet System. - Nikolay A. Kolchanov; Elena A. Ananko; Vitali A. Likhoshvai; Olga A. Podkolodnaya; Elena V. Ignatieva; Alexander V. Ratushny; Yuri G. Matushkin (Gene Regulations and Metabolism, 2002)

GeneNet database: description and modeling of gene networks. - Nikolay A. Kolchanov; Eugenia A. Nedosekina; Elena A. Ananko; Vitali A. Likhoshvai; Nikolay L. Podkolodny; Alexander V. Ratushny; Irina L. Stepanenko; Olga A. Podkolodnaya; Elena V. Ignatieva; Yuri G. Matushkin (Silico Biol., 2002)

GeneNet in 2005. - Elena A. Ananko; Nikolay L. Podkolodny; Irina L. Stepanenko; Olga A. Podkolodnaya; D. A. Rasskazov; Denis S. Miginsky; Vitali A. Likhoshvai; Alexander V. Ratushny; N. N. Podkolodnaya; Nikolay A. Kolchanov (Nucleic Acids Res., 2005)

A Cellular Automaton to Model the Development of Primary Shoot Meristems of Arabidopsis thaliana. - Ilya R. Akberdin; Evgeniy A. Ozonov; Victoria V. Mironova; Nadezda A. Omelyanchuk; Vitali A. Likhoshvai; Dmytry N. Gorpinchenko; Nikolay A. Kolchanov (J. Bioinform. Comput. Biol., 2007)

Generalized Hill Function Method for Modeling Molecular Processes. - Vitali A. Likhoshvai; Alexander V. Ratushny (J. Bioinform. Comput. Biol., 2007)

Mathematical Model for Suppression of Subgenomic Hepatitis C Virus RNA Replication in Cell Culture. - Elena L. Mishchenko; Kirill D. Bezmaternykh; Vitali A. Likhoshvai; Alexander V. Ratushny; Tamara M. Khlebodarova; Natalia Yu. Sournina; Vladimir A. Ivanisenko; Nikolay A. Kolchanov (J. Bioinform. Comput. Biol., 2007)

A plausible mechanism for auxin patterning along the developing root. - Victoria V. Mironova; Nadezda A. Omelyanchuk; Guy Yosiphon; Stanislav I. Fadeev; Nikolay A. Kolchanov; Eric Mjolsness; Vitali A. Likhoshvai (BMC Syst. Biol., 2010)

On the Chaos in gene Networks. - Vitali A. Likhoshvai; Stanislav I. Fadeev; Vladislav V. Kogai; Tamara M. Khlebodarova (J. Bioinform. Comput. Biol., 2013)

How Multiple Auxin Responsive Elements May Interact in plant promoters: a Reverse Problem solution. - Victoria V. Mironova; Nadezda A. Omelyanchuk; Maria S. Savina; Petr M. Ponomarenko; Mikhail P. Ponomarenko; Vitali A. Likhoshvai; Nikolay A. Kolchanov (J. Bioinform. Comput. Biol., 2013)

Mathematical Modeling of Auxin Transport in Protoxylem and Protophloem of Arabidopsis thaliana Root tips. - Ekaterina S. Novoselova; Victoria V. Mironova; Nadezda A. Omelyanchuk; Fedor V. Kazantsev; Vitali A. Likhoshvai (J. Bioinform. Comput. Biol., 2013)

Mathematical modeling of bacterial cell cycle: The problem of coordinating genome replication with cell growth. - Vitali A. Likhoshvai; Tamara M. Khlebodarova (J. Bioinform. Comput. Biol., 2014)

Alternative splicing can lead to chaos. - Vitali A. Likhoshvai; Vladislav V. Kogai; Stanislav I. Fadeev; Tamara M. Khlebodarova (J. Bioinform. Comput. Biol., 2015)

Multiple Scenarios of Transition to Chaos in the Alternative Splicing Model. - Vladislav V. Kogai; Vitali A. Likhoshvai; Stanislav I. Fadeev; Tamara M. Khlebodarova (Int. J. Bifurc. Chaos, 2017)

Chaos and hyperchaos in simple gene network with negative feedback and time delays. - Tamara M. Khlebodarova; Vladislav V. Kogai; Stanislav I. Fadeev; Vitali A. Likhoshvai (J. Bioinform. Comput. Biol., 2017)

MAMMOTh: A new database for curated mathematical models of biomolecular systems. - Fedor V. Kazantsev; Ilya R. Akberdin; Sergey A. Lashin; Natalia Ree; Vladimir Timonov; Alexander V. Ratushny; Tamara M. Khlebodarova; Vitali A. Likhoshvai (J. Bioinform. Comput. Biol., 2018)

On the dynamical aspects of local translation at the activated synapse. - Tamara M. Khlebodarova; Vladislav V. Kogai; Vitali A. Likhoshvai (BMC Bioinform., 2020)

Limit cycles in models of circular gene networks regulated by negative feedback loops. - Vitali A. Likhoshvai; Vladimir P. Golubyatnikov; Tamara M. Khlebodarova (BMC Bioinform., 2020)