Estimating Costs and Benefits of CTL Escape Mutations in SIV/HIV Infection. - Vitaly V. Ganusov; Rob J. De Boer (PLoS Comput. Biol., 2006)

How Does Cross-Reactive Stimulation Affect the Longevity of CD8+ T Cell Memory? - Vitaly V. Ganusov; Sergei S. Pilyugin; Rafi Ahmed; Rustom Antia (PLoS Comput. Biol., 2006)

Correction: How Does Cross-Reactive Stimulation Affect the Longevity of CD8+ T Cell Memory? - Vitaly V. Ganusov; Sergei S. Pilyugin; Rafi Ahmed; Rustom Antia (PLoS Comput. Biol., 2006)

Explicit Kinetic Heterogeneity: Mathematical Models for Interpretation of Deuterium Labeling of Heterogeneous Cell Populations. - Vitaly V. Ganusov; José A. M. Borghans; Rob J. De Boer (PLoS Comput. Biol., 2010)

Classification of T cell movement tracks allows for prediction of cell function. - Reka K. Kelemen; Gengen F. He; Hannah L. Woo; Thomas Lane; Caroline Rempe; Jun Wang 028; Ian A. Cockburn; Rogerio Amino; Vitaly V. Ganusov; Michael W. Berry (Int. J. Comput. Biol. Drug Des., 2014)

Mathematical Modeling Reveals Kinetics of Lymphocyte Recirculation in the Whole Organism. - Vitaly V. Ganusov; Jeremy Auerbach (PLoS Comput. Biol., 2014)

Competition for Antigen between Th1 and Th2 Responses Determines the Timing of the Immune Response Switch during Mycobaterium avium Subspecies paratuberulosis Infection in Ruminants. - Gesham Magombedze; Shigetoshi Eda; Vitaly V. Ganusov (PLoS Comput. Biol., 2014)

Broad CTL Response in Early HIV Infection Drives Multiple Concurrent CTL Escapes. - Sivan Leviyang; Vitaly V. Ganusov (PLoS Comput. Biol., 2015)

Do microscopy imaging frequency and experiment duration impact the analysis of T cell movement? - Viktor Zenkov; James O'Connor; Hayley McNamara; Ian A. Cockburn; Vitaly V. Ganusov (BCB, 2021)

A New Method Based on the von Mises-Fisher Distribution Shows that a Minority of Liver-Localized CD8 T Cells Display Hard-To-Detect Attraction to Plasmodium-Infected Hepatocytes. - Viktor Zenkov; James O'Connor; Ian A. Cockburn; Vitaly V. Ganusov (Frontiers Bioinform., 2021)

A brief overview of mathematical modeling of the within-host dynamics of Mycobacterium tuberculosis. - Dipanjan Chakraborty 001; Saikat Batabyal; Vitaly V. Ganusov (Frontiers Appl. Math. Stat., 2024)

Opening Pandora's box: caveats with using toolbox-based approaches in mathematical modeling in biology. - Vitaly V. Ganusov (Frontiers Appl. Math. Stat., 2024)