NuST: analysis of the interplay between nucleoid organization and gene expression. - Vittore F. Scolari; Mina Zarei; Matteo Osella; Marco Cosentino Lagomarsino (Bioinform., 2012)

Serpentine: a flexible 2D binning method for differential Hi-C analysis. - Lyam Baudry; Gaël A. Millot; Agnes Thierry; Romain Koszul; Vittore F. Scolari (Bioinform., 2020)