XdomView: protein domain and exon position visualization. - Vivek Gopalan; Tin Wee Tan; Shoba Ranganathan (Bioinform., 2003)

Xpro: database of eukaryotic protein-encoding genes. - Vivek Gopalan; Tin Wee Tan; Bernett T. K. Lee; Shoba Ranganathan (Nucleic Acids Res., 2004)

Nexplorer: phylogeny-based exploration of sequence family data. - Vivek Gopalan; Wei-Gang Qiu; Michael Z. Chen; Arlin Stoltzfus (Bioinform., 2006)

Bio: : NEXUS: a Perl API for the NEXUS format for comparative biological data. - Thomas Hladish; Vivek Gopalan; Chengzhi Liang; Wei-Gang Qiu; Peter Yang; Arlin Stoltzfus (BMC Bioinform., 2007)

Bioinformatics Applications Discovery and Composition with the Mobyle Suite and MobyleNet. - Hervé Ménager; Vivek Gopalan; Bertrand Néron; Sandrine Larroudé; Julien Maupetit; Adrien Saladin; Pierre Tufféry; Yentram Huyen; Bernard Caudron (RED, 2010)

HASP server: a database and structural visualization platform for comparative models of influenza A hemagglutinin proteins. - Xavier I. Ambroggio; Jennifer Dommer; Vivek Gopalan; Eleca J. Dunham; Jeffery K. Taubenberger; Darrell E. Hurt (BMC Bioinform., 2013)

The Papillomavirus Episteme: a central resource for papillomavirus sequence data and analysis. - Koenraad Van Doorslaer; Qina Tan; Sandhya Xirasagar; Sandya Bandaru; Vivek Gopalan; Yasmin Mohamoud; Yentram Huyen; Alison A. McBride (Nucleic Acids Res., 2013)