SPACE: a suite of tools for protein structure prediction and analysis based on complementarity and environment. - Vladimir Sobolev; Eran Eyal; Sergey Gerzon; Vladimir Potapov; Mariana Babor; Jaime Prilusky; Marvin Edelman (Nucleic Acids Res., 2005)

Four Distances between Pairs of Amino Acids Provide a Precise Description of their Interaction. - Mati Cohen; Vladimir Potapov; Gideon Schreiber (PLoS Comput. Biol., 2009)

Protein structure modelling and evaluation based on a 4-distance description of side-chain interactions. - Vladimir Potapov; Mati Cohen; Yuval Inbar; Gideon Schreiber (BMC Bioinform., 2010)

Data-Driven Prediction and Design of bZIP Coiled-Coil Interactions. - Vladimir Potapov; Jenifer B. Kaplan; Amy E. Keating (PLoS Comput. Biol., 2015)