A new paradigm for pattern recognition of drugs. - Vladimir Potemkin 001; Maria A. Grishina (J. Comput. Aided Mol. Des., 2008)

Technique for Energy Decomposition in the Study of "Receptor-Ligand" Complexes. - Vladimir Potemkin 001; Alexander A. Pogrebnoy; Maria A. Grishina (J. Chem. Inf. Model., 2009)

Online chemical modeling environment (OCHEM): web platform for data storage, model development and publishing of chemical information. - Iurii Sushko; Sergii Novotarskyi; Robert Körner; Anil Kumar Pandey; Matthias Rupp; Wolfram Teetz; Stefan Brandmaier; Ahmed Abdelaziz; Volodymyr V. Prokopenko; Vsevolod Yu. Tanchuk; Roberto Todeschini; Alexandre Varnek; et al. (J. Comput. Aided Mol. Des., 2011)

Online chemical modeling environment (OCHEM): web platform for data storage, model development and publishing of chemical information. - Iurii Sushko; Anil Kumar Pandey; Sergii Novotarskyi; Robert Körner; Matthias Rupp; Wolfram Teetz; Stefan Brandmaier; Ahmed Abdelaziz; Volodymyr V. Prokopenko; Vsevolod Yu. Tanchuk; Roberto Todeschini; Alexandre Varnek; et al. (J. Cheminformatics, 2011)

ToxAlerts: A Web Server of Structural Alerts for Toxic Chemicals and Compounds with Potential Adverse Reactions. - Iurii Sushko; Elena Salmina; Vladimir Potemkin 001; Gennadiy Poda; Igor V. Tetko (J. Chem. Inf. Model., 2012)

An approximation of the Cioslowski-Mixon bond order indexes using the AlteQ approach. - Elena Salmina; Maria A. Grishina; Vladimir Potemkin 001 (J. Comput. Aided Mol. Des., 2013)

Nonparametric chemical descriptors for the calculation of ligand-biopolymer affinities with machine-learning scoring functions. - Edelmiro Moman; Maria A. Grishina; Vladimir Potemkin 001 (J. Comput. Aided Mol. Des., 2019)

A Systems Biology Driven Approach to Map the EP300 Interactors Using Comprehensive Protein Interaction Network. - Shivananda Kandagalla; Maria A. Grishina; Vladimir Potemkin 001; Sharath Belenahalli Shekarappa; Pavan Gollapalli (BSB, 2020)

Classification and functional analyses of putative virulence factors of Mycobacterium tuberculosis: A combined sequence and structure based study. - Mohd. Shahbaaz; Vladimir Potemkin 001; Krishna Bisetty; Md. Imtaiyaz Hassan; Mostafa A. Hussien (Comput. Biol. Chem., 2020)

Use of the Complementarity Principle in Docking Procedures: A New Approach for Evaluating the Correctness of Binding Poses. - Hrvoje Rimac; Maria A. Grishina; Vladimir Potemkin 001 (J. Chem. Inf. Model., 2021)

The design of compounds with desirable properties - The anti-HIV case study. - Jurica Novak; Prateek Pathak; Maria A. Grishina; Vladimir A. Potemkin (J. Comput. Chem., 2023)