Longest Common Subsequences. - Mike Paterson; Vlado Dancík (MFCS, 1994)

Upper Bounds for the Expected Length of a Longest Common Subsequence of Two Binary Sequences. - Vlado Dancík; Mike Paterson (Random Struct. Algorithms, 1995)

Complexity of Boolean Functions Over Bases with Unbounded Fan-In Gates. - Vlado Dancík (Inf. Process. Lett., 1996)

Hardness of flip-cut problems from optical mapping [DNA molecules application]. - Vlado Dancík; Sridhar Hannenhalli; S. Muthukrishnan 001 (SEQUENCES, 1997)

Local Rules for Protein Folding on a Triangular Lattice and Generalized Hydrophobicity in the HP Model. - Richa Agarwala; Serafim Batzoglou; Vlado Dancík; Scott E. Decatur; Martin Farach; Sridhar Hannenhalli; Steven Skiena (SODA, 1997)

Local Rules for Protein Folding on a Triangular Lattice and Generalized Hydrophobicity in the HP Model. - Richa Agarwala; Serafim Batzoglou; Vlado Dancík; Scott E. Decatur; Sridhar Hannenhalli; Martin Farach; S. Muthukrishnan 001; Steven Skiena (J. Comput. Biol., 1997)

Hardness of Flip-Cut Problems from Optical Mapping. - Vlado Dancík; Sridhar Hannenhalli; S. Muthukrishnan 001 (J. Comput. Biol., 1997)

Common Subsequences and Supersequences and their Expected Length. - Vlado Dancík (Comb. Probab. Comput., 1998)

Estimation for Restriction Sites Observed by Optical Mapping Using Reversible-Jump Markov Chain Monte Carlo - Jae Kyu Lee; Vlado Dancík; Michael S. Waterman (J. Comput. Biol., 1998)

De Novo peptide sequencing via tandem mass spectrometry: a graph-theoretical approach. - Vlado Dancík; Theresa A. Addona; Karl R. Clauser; James E. Vath (RECOMB, 1999)

De Novo Peptide Sequencing via Tandem Mass Spectrometry. - Vlado Dancík; Theresa A. Addona; Karl R. Clauser; James E. Vath; Pavel A. Pevzner (J. Comput. Biol., 1999)

Mutation-Tolerant Protein Identification by Mass Spectrometry. - Pavel A. Pevzner; Vlado Dancík; Chris L. Tang (J. Comput. Biol., 2000)

Analyzing Protein Lists with Large Networks: Edge-Count Probabilities in Random Graphs with Given Expected Degrees. - Joël R. Pradines; Victor Farutin; Steve Rowley; Vlado Dancík (J. Comput. Biol., 2005)

Connectedness Profiles in Protein Networks for the Analysis of Gene Expression Data. - Joël R. Pradines; Vlado Dancík; Alan Ruttenberg; Victor Farutin (RECOMB, 2007)

CTD2 Dashboard: a searchable web interface to connect validated results from the Cancer Target Discovery and Development Network. - Bülent Arman Aksoy; Vlado Dancík; Kenneth Smith 001; Jessica N. Mazerik; Zhou Ji; Benjamin E. Gross; Olga Nikolova; Nadia Jaber; Andrea Califano; Stuart L. Schreiber; Daniela S. Gerhard; Leandro Hermida; et al. (Database J. Biol. Databases Curation, 2017)

Biolink Model: A Universal Schema for Knowledge Graphs in Clinical, Biomedical, and Translational Science. - Deepak R. Unni; Sierra A. T. Moxon; Michael Bada; Matthew H. Brush; Richard M. Bruskiewich; Paul A. Clemons; Vlado Dancík; Michel Dumontier; Karamarie Fecho; Gustavo Glusman; Jennifer J. Hadlock; Nomi L. Harris; et al. (CoRR, 2022)